STRINGSTRING
ARAM_002672 ARAM_002672 ARAM_002947 ARAM_002947 ARAM_004708 ARAM_004708 ARAM_002643 ARAM_002643 ARAM_000539 ARAM_000539
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ARAM_002672Beta-xylanase. (310 aa)
ARAM_002947Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family. (222 aa)
ARAM_004708Putative alpha-N-arabinofuranosidase A. (640 aa)
ARAM_002643Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family. (297 aa)
ARAM_000539Putative C6 transcription factor. (881 aa)
Your Current Organism:
Aspergillus rambellii
NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580
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