STRINGSTRING
ARAM_003809 ARAM_003809 ARAM_005350 ARAM_005350 ARAM_000934 ARAM_000934 ARAM_000901 ARAM_000901 ARAM_001990 ARAM_001990 ARAM_001676 ARAM_001676 ARAM_001664 ARAM_001664 ARAM_006907 ARAM_006907 ARAM_002785 ARAM_002785 ARAM_001802 ARAM_001802 ARAM_002454 ARAM_002454 ARAM_003938 ARAM_003938 ARAM_004025 ARAM_004025 ARAM_001359 ARAM_001359 ARAM_005153 ARAM_005153 ARAM_007398 ARAM_007398 ARAM_000763 ARAM_000763 ARAM_003005 ARAM_003005 ARAM_001215 ARAM_001215 ARAM_001496 ARAM_001496 ARAM_006017 ARAM_006017 ARAM_005434 ARAM_005434 ARAM_002657 ARAM_002657 ARAM_004045 ARAM_004045 ARAM_000330 ARAM_000330 YTM1 YTM1 ARAM_002720 ARAM_002720 ARAM_004086 ARAM_004086 ARAM_004124 ARAM_004124 ARAM_005697 ARAM_005697 ARAM_001871 ARAM_001871 ARAM_007174 ARAM_007174 ARAM_001424 ARAM_001424 ARAM_006255 ARAM_006255 ARAM_005545 ARAM_005545 ARAM_003433 ARAM_003433 ARAM_007361 ARAM_007361 ARAM_001042 ARAM_001042 ARAM_006401 ARAM_006401 ARAM_002057 ARAM_002057 ERB1 ERB1 ARAM_005206 ARAM_005206 ARAM_002197 ARAM_002197 ARAM_002758 ARAM_002758 ARAM_000961 ARAM_000961 ARAM_007229 ARAM_007229 ARAM_003459 ARAM_003459 ARAM_004894 ARAM_004894 ARAM_000447 ARAM_000447 ARAM_001643 ARAM_001643 ARAM_005444 ARAM_005444 ARAM_005873 ARAM_005873 ARAM_000326 ARAM_000326 ARAM_002852 ARAM_002852 ARAM_007389 ARAM_007389 ARAM_001044 ARAM_001044 ARAM_002036 ARAM_002036 ARAM_000492 ARAM_000492 ARAM_004237 ARAM_004237 ARAM_004846 ARAM_004846 ARAM_003948 ARAM_003948 ARAM_004599 ARAM_004599 ARAM_003081 ARAM_003081 ARAM_005286 ARAM_005286 ARAM_002524 ARAM_002524 ARAM_003234 ARAM_003234 ARAM_001214 ARAM_001214 ARAM_004303 ARAM_004303 ARAM_001158 ARAM_001158 ARAM_001653 ARAM_001653 ARAM_003984 ARAM_003984 ARAM_006553 ARAM_006553 ARAM_004089 ARAM_004089 ARAM_007270 ARAM_007270 ARAM_005693 ARAM_005693 ARAM_005226 ARAM_005226 ARAM_000660 ARAM_000660 ARAM_002779 ARAM_002779 ARAM_007537 ARAM_007537 SPB1 SPB1 ARAM_002525 ARAM_002525 ARAM_002520 ARAM_002520 ARAM_006330 ARAM_006330 ARAM_000736 ARAM_000736 ARAM_004296 ARAM_004296 ARAM_003186 ARAM_003186 ARAM_007493 ARAM_007493 ARAM_005111 ARAM_005111 ARAM_006001 ARAM_006001 ARAM_001744 ARAM_001744 ARAM_003111 ARAM_003111 ARAM_003815 ARAM_003815 ARAM_006063 ARAM_006063 ARAM_001140 ARAM_001140 ARAM_004927 ARAM_004927 ARAM_007028 ARAM_007028 ARAM_005008 ARAM_005008 ARAM_007020 ARAM_007020 ARAM_006801 ARAM_006801 ARAM_003142 ARAM_003142 NOP7 NOP7 ARAM_003739 ARAM_003739 ARAM_005737 ARAM_005737 ARAM_006679 ARAM_006679 ARAM_006665 ARAM_006665
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ARAM_003809WD_REPEATS_REGION domain-containing protein. (583 aa)
ARAM_005350ATP-dependent RNA helicase dbp8; Belongs to the DEAD box helicase family. (529 aa)
ARAM_000934Uncharacterized protein. (961 aa)
ARAM_000901Putative ATP-dependent RNA helicase (Hrh1). (822 aa)
ARAM_001990Uncharacterized protein; Belongs to the DEAD box helicase family. (767 aa)
ARAM_001676OBG-type G domain-containing protein. (659 aa)
ARAM_001664KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (338 aa)
ARAM_006907Putative pectate lyase. (234 aa)
ARAM_002785Uncharacterized protein. (285 aa)
ARAM_001802RRM domain-containing protein. (533 aa)
ARAM_002454Uncharacterized protein. (902 aa)
ARAM_003938Uncharacterized protein. (226 aa)
ARAM_004025Sas10 domain-containing protein. (662 aa)
ARAM_001359Uncharacterized protein. (386 aa)
ARAM_005153Uncharacterized protein. (727 aa)
ARAM_007398S-adenosylmethionine-dependent methyltransferase superfamily domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (778 aa)
ARAM_000763rRNA methyltransferase NOP1. (316 aa)
ARAM_003005U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (647 aa)
ARAM_001215Ribosome biogenesis protein. (363 aa)
ARAM_001496Uncharacterized protein. (554 aa)
ARAM_006017Putative ATP dependent RNA helicase (Dbp9). (640 aa)
ARAM_005434Nop domain-containing protein. (584 aa)
ARAM_002657Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (116 aa)
ARAM_004045Uncharacterized protein. (352 aa)
ARAM_000330rRNA processing protein. (624 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (1323 aa)
ARAM_002720U3 small nucleolar ribonucleoprotein. (299 aa)
ARAM_004086Uncharacterized protein. (752 aa)
ARAM_004124WD repeat protein. (743 aa)
ARAM_005697Uncharacterized protein. (362 aa)
ARAM_001871Uncharacterized protein. (697 aa)
ARAM_007174DRIM domain-containing protein. (2605 aa)
ARAM_001424NUC153 domain-containing protein. (740 aa)
ARAM_006255RTC domain-containing protein. (498 aa)
ARAM_005545Uncharacterized protein. (824 aa)
ARAM_003433WD_REPEATS_REGION domain-containing protein. (534 aa)
ARAM_007361RNA helicase. (639 aa)
ARAM_001042RNA helicase. (812 aa)
ARAM_006401WD_REPEATS_REGION domain-containing protein. (1036 aa)
ARAM_002057WD_REPEATS_REGION domain-containing protein. (498 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (729 aa)
ARAM_005206Uncharacterized protein. (404 aa)
ARAM_002197DEAH-box RNA helicase (Dhr1). (1204 aa)
ARAM_002758Uncharacterized protein. (341 aa)
ARAM_000961Utp12 domain-containing protein. (847 aa)
ARAM_007229Uncharacterized protein. (970 aa)
ARAM_003459Ribosome biogenesis protein. (333 aa)
ARAM_004894WD_REPEATS_REGION domain-containing protein. (542 aa)
ARAM_000447Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (246 aa)
ARAM_001643rRNA-processing protein. (190 aa)
ARAM_005444Ribosome biogenesis protein. (1190 aa)
ARAM_005873Uncharacterized protein. (1816 aa)
ARAM_000326WD_REPEATS_REGION domain-containing protein. (977 aa)
ARAM_002852Uncharacterized protein. (311 aa)
ARAM_007389Small nucleolar ribonucleoprotein. (902 aa)
ARAM_001044ATP-dependent RNA helicase DBP10. (933 aa)
ARAM_002036BP28CT domain-containing protein. (1804 aa)
ARAM_000492Ribosome biogenesis protein. (551 aa)
ARAM_004237Uncharacterized protein; Belongs to the DEAD box helicase family. (766 aa)
ARAM_004846RNA processing protein. (255 aa)
ARAM_003948Uncharacterized protein. (581 aa)
ARAM_004599RRM domain-containing protein. (475 aa)
ARAM_003081U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (689 aa)
ARAM_005286Putative nucleolar ATPase Kre33. (1087 aa)
ARAM_002524Brix domain-containing protein. (439 aa)
ARAM_003234Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (220 aa)
ARAM_001214F-box domain protein. (358 aa)
ARAM_004303WD_REPEATS_REGION domain-containing protein. (946 aa)
ARAM_001158rRNA-processing protein; Involved in nucleolar integrity and required for processing of the pre-rRNA for the 60S ribosome subunit. Belongs to the CGR1 family. (114 aa)
ARAM_001653AB hydrolase-1 domain-containing protein. (391 aa)
ARAM_003984rRNA processing protein. (396 aa)
ARAM_006553CBF domain-containing protein. (1103 aa)
ARAM_004089Ribosome assembly protein. (789 aa)
ARAM_007270NUC173 domain-containing protein. (1287 aa)
ARAM_005693Uncharacterized protein. (184 aa)
ARAM_005226Brix domain-containing protein. (406 aa)
ARAM_000660U3 small nucleolar RNA-associated protein 22. (1101 aa)
ARAM_002779Pre-rRNA processing nucleolar protein. (500 aa)
ARAM_007537Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (711 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (790 aa)
ARAM_002525ATP-dependent RNA helicase. (447 aa)
ARAM_002520WD_REPEATS_REGION domain-containing protein. (352 aa)
ARAM_006330Uncharacterized protein. (261 aa)
ARAM_000736Uncharacterized protein. (303 aa)
ARAM_004296WD_REPEATS_REGION domain-containing protein. (542 aa)
ARAM_00318660S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
ARAM_007493S4 RNA-binding domain-containing protein. (188 aa)
ARAM_005111RNA helicase. (631 aa)
ARAM_006001Uncharacterized protein. (1116 aa)
ARAM_001744Uncharacterized protein. (378 aa)
ARAM_003111Uncharacterized protein; Belongs to the DEAD box helicase family. (650 aa)
ARAM_003815WD_REPEATS_REGION domain-containing protein. (1025 aa)
ARAM_006063GTP-binding protein. (546 aa)
ARAM_001140Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (560 aa)
ARAM_004927Uncharacterized protein. (324 aa)
ARAM_007028TRASH domain-containing protein. (190 aa)
ARAM_005008CPL domain-containing protein. (673 aa)
ARAM_007020Uncharacterized protein. (236 aa)
ARAM_006801Uncharacterized protein. (270 aa)
ARAM_003142Fcf2 domain-containing protein. (197 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (878 aa)
ARAM_003739Putative ATP-dependent RNA helicase (Drs1). (834 aa)
ARAM_005737Protein MAK16; Belongs to the MAK16 family. (322 aa)
ARAM_006679MI domain-containing protein. (867 aa)
ARAM_006665WD_REPEATS_REGION domain-containing protein. (941 aa)
Your Current Organism:
Aspergillus rambellii
NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580
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