STRINGSTRING
ARAM_001676 ARAM_001676 ARAM_001359 ARAM_001359 ARAM_007398 ARAM_007398 YTM1 YTM1 ERB1 ERB1 ARAM_000447 ARAM_000447 ARAM_004599 ARAM_004599 ARAM_004089 ARAM_004089 ARAM_007537 ARAM_007537 SPB1 SPB1 ARAM_006330 ARAM_006330 ARAM_003186 ARAM_003186 ARAM_005111 ARAM_005111 ARAM_006063 ARAM_006063 ARAM_001140 ARAM_001140 ARAM_007028 ARAM_007028 NOP7 NOP7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ARAM_001676OBG-type G domain-containing protein. (659 aa)
ARAM_001359Uncharacterized protein. (386 aa)
ARAM_007398S-adenosylmethionine-dependent methyltransferase superfamily domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (778 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (1323 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (729 aa)
ARAM_000447Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (246 aa)
ARAM_004599RRM domain-containing protein. (475 aa)
ARAM_004089Ribosome assembly protein. (789 aa)
ARAM_007537Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (711 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (790 aa)
ARAM_006330Uncharacterized protein. (261 aa)
ARAM_00318660S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
ARAM_005111RNA helicase. (631 aa)
ARAM_006063GTP-binding protein. (546 aa)
ARAM_001140Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (560 aa)
ARAM_007028TRASH domain-containing protein. (190 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (878 aa)
Your Current Organism:
Aspergillus rambellii
NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580
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