(13 nodes) Retrograde transport at the Trans-Golgi-Network network (Aspergillus rambellii)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

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protein homology

Your Input:
	ARAM_002408	SNARE domain protein. (251 aa)
	ARAM_001873	Sec34-like family protein. (777 aa)
	ARAM_001785	Dor1-like family protein. (499 aa)
	ARAM_006943	COG2 domain-containing protein. (296 aa)
	ARAM_007280	Uncharacterized protein. (291 aa)
	ARAM_002209	Uncharacterized protein. (778 aa)
	ARAM_003806	Cog4 domain-containing protein. (878 aa)
	ARAM_002702	DAO domain-containing protein. (931 aa)
	ARAM_003034	Putative GARP complex subunit Vps53. (830 aa)
	ARAM_002577	SNARE complex subunit (Tlg2); Belongs to the syntaxin family. (391 aa)
	ARAM_000950	Vesicle transport v-snare protein. (255 aa)
	ARAM_002249	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events. (747 aa)
	ARAM_004458	Uncharacterized protein. (1075 aa)

Your Current Organism:

Aspergillus rambellii

NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARAM_000950	ARAM_001785	A0A0F8X9F9	A0A0F8U9V0	Vesicle transport v-snare protein.	Dor1-like family protein.	0.829
ARAM_000950	ARAM_001873	A0A0F8X9F9	A0A0F8TZU6	Vesicle transport v-snare protein.	Sec34-like family protein.	0.868
ARAM_000950	ARAM_002209	A0A0F8X9F9	A0A0F8VR98	Vesicle transport v-snare protein.	Uncharacterized protein.	0.741
ARAM_000950	ARAM_002249	A0A0F8X9F9	A0A0F8XCM3	Vesicle transport v-snare protein.	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.	0.854
ARAM_000950	ARAM_002408	A0A0F8X9F9	A0A0F8TXL7	Vesicle transport v-snare protein.	SNARE domain protein.	0.984
ARAM_000950	ARAM_002577	A0A0F8X9F9	A0A0F8WYX4	Vesicle transport v-snare protein.	SNARE complex subunit (Tlg2); Belongs to the syntaxin family.	0.998
ARAM_000950	ARAM_002702	A0A0F8X9F9	A0A0F8WLT5	Vesicle transport v-snare protein.	DAO domain-containing protein.	0.791
ARAM_000950	ARAM_003034	A0A0F8X9F9	A0A0F8WYT5	Vesicle transport v-snare protein.	Putative GARP complex subunit Vps53.	0.807
ARAM_000950	ARAM_003806	A0A0F8X9F9	A0A0F8W2R6	Vesicle transport v-snare protein.	Cog4 domain-containing protein.	0.816
ARAM_000950	ARAM_004458	A0A0F8X9F9	A0A0F8XF20	Vesicle transport v-snare protein.	Uncharacterized protein.	0.737
ARAM_000950	ARAM_006943	A0A0F8X9F9	A0A0F8US40	Vesicle transport v-snare protein.	COG2 domain-containing protein.	0.808
ARAM_000950	ARAM_007280	A0A0F8X9F9	A0A0F8V5X1	Vesicle transport v-snare protein.	Uncharacterized protein.	0.811
ARAM_001785	ARAM_000950	A0A0F8U9V0	A0A0F8X9F9	Dor1-like family protein.	Vesicle transport v-snare protein.	0.829
ARAM_001785	ARAM_001873	A0A0F8U9V0	A0A0F8TZU6	Dor1-like family protein.	Sec34-like family protein.	0.998
ARAM_001785	ARAM_002209	A0A0F8U9V0	A0A0F8VR98	Dor1-like family protein.	Uncharacterized protein.	0.999
ARAM_001785	ARAM_002249	A0A0F8U9V0	A0A0F8XCM3	Dor1-like family protein.	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.	0.999
ARAM_001785	ARAM_002408	A0A0F8U9V0	A0A0F8TXL7	Dor1-like family protein.	SNARE domain protein.	0.736
ARAM_001785	ARAM_002577	A0A0F8U9V0	A0A0F8WYX4	Dor1-like family protein.	SNARE complex subunit (Tlg2); Belongs to the syntaxin family.	0.889
ARAM_001785	ARAM_002702	A0A0F8U9V0	A0A0F8WLT5	Dor1-like family protein.	DAO domain-containing protein.	0.829
ARAM_001785	ARAM_003034	A0A0F8U9V0	A0A0F8WYT5	Dor1-like family protein.	Putative GARP complex subunit Vps53.	0.820