27 items (Aspergillus rambellii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ARAM_007797	Ribo_biogen_C domain-containing protein. (255 aa)
	ARAM_002534	Uncharacterized protein. (427 aa)
	ARAM_002959	Uncharacterized protein. (129 aa)
	ARAM_006942	Uncharacterized protein. (432 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (790 aa)
	ARAM_006224	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (200 aa)
	ARAM_004780	TRUD domain-containing protein. (745 aa)
	ARAM_005286	Putative nucleolar ATPase Kre33. (1087 aa)
	ARAM_007318	Cytidine and deoxycytidylate deaminase zinc-binding domain protein. (222 aa)
	ARAM_002319	Uncharacterized protein. (494 aa)
	ARAM_002308	Ribosomal_L7Ae domain-containing protein. (225 aa)
	ARAM_000293	Nucleolus protein. (214 aa)
	ARAM_000287	DUF2431 domain-containing protein. (463 aa)
	ARAM_004846	RNA processing protein. (255 aa)
	ARAM_006900	BTB domain-containing protein. (254 aa)
	ARAM_006449	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (556 aa)
	ARAM_002218	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (400 aa)
	ARAM_000289	PUA domain-containing protein. (779 aa)
	ARAM_001971	21S rRNA (Uridine(2791)-2'-O)-methyltransferase MRM2. (305 aa)
	ARAM_006605	HAD_SAK_1 domain-containing protein. (589 aa)
	ARAM_007283	Uncharacterized protein. (650 aa)
	ARAM_005434	Nop domain-containing protein. (584 aa)
	ARAM_004140	SpoU_sub_bind domain-containing protein. (502 aa)
	ARAM_006654	Uncharacterized protein. (279 aa)
	ARAM_000763	rRNA methyltransferase NOP1. (316 aa)
	ARAM_007398	S-adenosylmethionine-dependent methyltransferase superfamily domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (778 aa)
	ARAM_002918	BTB domain-containing protein. (280 aa)

Your Current Organism:

Aspergillus rambellii

NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARAM_000287	ARAM_005286	A0A0F8VU07	A0A0F8WHS5	DUF2431 domain-containing protein.	Putative nucleolar ATPase Kre33.	0.404
ARAM_000287	ARAM_007398	A0A0F8VU07	A0A0F8UEG1	DUF2431 domain-containing protein.	S-adenosylmethionine-dependent methyltransferase superfamily domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.580
ARAM_000289	ARAM_000293	A0A0F8V4K2	A0A0F8VU29	PUA domain-containing protein.	Nucleolus protein.	0.750
ARAM_000289	ARAM_000763	A0A0F8V4K2	A0A0F8UEN3	PUA domain-containing protein.	rRNA methyltransferase NOP1.	0.996
ARAM_000289	ARAM_001971	A0A0F8V4K2	A0A0F8UY53	PUA domain-containing protein.	21S rRNA (Uridine(2791)-2'-O)-methyltransferase MRM2.	0.539
ARAM_000289	ARAM_002218	A0A0F8V4K2	A0A0F8VH30	PUA domain-containing protein.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.677
ARAM_000289	ARAM_002308	A0A0F8V4K2	A0A0F8W6G5	PUA domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.999
ARAM_000289	ARAM_004140	A0A0F8V4K2	A0A0F8UIE0	PUA domain-containing protein.	SpoU_sub_bind domain-containing protein.	0.549
ARAM_000289	ARAM_004780	A0A0F8V4K2	A0A0F8WNF7	PUA domain-containing protein.	TRUD domain-containing protein.	0.654
ARAM_000289	ARAM_004846	A0A0F8V4K2	A0A0F8VRV2	PUA domain-containing protein.	RNA processing protein.	0.533
ARAM_000289	ARAM_005286	A0A0F8V4K2	A0A0F8WHS5	PUA domain-containing protein.	Putative nucleolar ATPase Kre33.	0.957
ARAM_000289	ARAM_005434	A0A0F8V4K2	A0A0F8UKC4	PUA domain-containing protein.	Nop domain-containing protein.	0.992
ARAM_000289	ARAM_006224	A0A0F8V4K2	A0A0F8WWA5	PUA domain-containing protein.	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.999
ARAM_000289	ARAM_006449	A0A0F8V4K2	A0A0F8VK23	PUA domain-containing protein.	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.516
ARAM_000289	ARAM_007318	A0A0F8V4K2	A0A0F8WGH8	PUA domain-containing protein.	Cytidine and deoxycytidylate deaminase zinc-binding domain protein.	0.598
ARAM_000289	ARAM_007398	A0A0F8V4K2	A0A0F8UEG1	PUA domain-containing protein.	S-adenosylmethionine-dependent methyltransferase superfamily domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.890
ARAM_000289	SPB1	A0A0F8V4K2	A0A0F8X1M7	PUA domain-containing protein.	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	0.893
ARAM_000293	ARAM_000289	A0A0F8VU29	A0A0F8V4K2	Nucleolus protein.	PUA domain-containing protein.	0.750
ARAM_000293	ARAM_002218	A0A0F8VU29	A0A0F8VH30	Nucleolus protein.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.663
ARAM_000763	ARAM_000289	A0A0F8UEN3	A0A0F8V4K2	rRNA methyltransferase NOP1.	PUA domain-containing protein.	0.996