24 items (Aspergillus rambellii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ARAM_000168	Uncharacterized protein. (388 aa)
	ARAM_002000	Ribonuclease P protein subunit. (305 aa)
	ARAM_000330	rRNA processing protein. (624 aa)
	ARAM_002657	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (116 aa)
	ARAM_005434	Nop domain-containing protein. (584 aa)
	ARAM_000763	rRNA methyltransferase NOP1. (316 aa)
	LSM5	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (71 aa)
	ARAM_002340	Uncharacterized protein. (202 aa)
	ARAM_000289	PUA domain-containing protein. (779 aa)
	ARAM_003138	Uncharacterized protein. (208 aa)
	ARAM_005091	Uncharacterized protein. (276 aa)
	ARAM_006605	HAD_SAK_1 domain-containing protein. (589 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (103 aa)
	ARAM_004486	U6 snRNA-associated Sm-like protein. (76 aa)
	ARAM_006595	U6 snRNA-associated Sm-like protein. (80 aa)
	ARAM_005511	Uncharacterized protein. (234 aa)
	ARAM_003462	Putative ribonuclease P complex subunit Pop2. (310 aa)
	ARAM_002779	Pre-rRNA processing nucleolar protein. (500 aa)
	ARAM_006224	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (200 aa)
	ARAM_003081	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (689 aa)
	ARAM_005456	Uncharacterized protein. (663 aa)
	ARAM_002308	Ribosomal_L7Ae domain-containing protein. (225 aa)
	ARAM_002333	Uncharacterized protein. (218 aa)
	ARAM_004999	Putative ribonuclease P complex subunit Pop1. (901 aa)

Your Current Organism:

Aspergillus rambellii

NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARAM_000168	ARAM_002000	A0A0F8VC62	A0A0F8UR85	Uncharacterized protein.	Ribonuclease P protein subunit.	0.995
ARAM_000168	ARAM_002333	A0A0F8VC62	A0A0F8W3D2	Uncharacterized protein.	Uncharacterized protein.	0.994
ARAM_000168	ARAM_002340	A0A0F8VC62	A0A0F8TYH3	Uncharacterized protein.	Uncharacterized protein.	0.930
ARAM_000168	ARAM_002657	A0A0F8VC62	A0A0F8ULT7	Uncharacterized protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.419
ARAM_000168	ARAM_003138	A0A0F8VC62	A0A0F8VPG3	Uncharacterized protein.	Uncharacterized protein.	0.937
ARAM_000168	ARAM_003462	A0A0F8VC62	A0A0F8XBC1	Uncharacterized protein.	Putative ribonuclease P complex subunit Pop2.	0.992
ARAM_000168	ARAM_004999	A0A0F8VC62	A0A0F8W295	Uncharacterized protein.	Putative ribonuclease P complex subunit Pop1.	0.981
ARAM_000168	ARAM_005511	A0A0F8VC62	A0A0F8UT29	Uncharacterized protein.	Uncharacterized protein.	0.917
ARAM_000289	ARAM_000330	A0A0F8V4K2	A0A0F8UMA1	PUA domain-containing protein.	rRNA processing protein.	0.531
ARAM_000289	ARAM_000763	A0A0F8V4K2	A0A0F8UEN3	PUA domain-containing protein.	rRNA methyltransferase NOP1.	0.996
ARAM_000289	ARAM_002308	A0A0F8V4K2	A0A0F8W6G5	PUA domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.999
ARAM_000289	ARAM_002657	A0A0F8V4K2	A0A0F8ULT7	PUA domain-containing protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.980
ARAM_000289	ARAM_002779	A0A0F8V4K2	A0A0F8WYF7	PUA domain-containing protein.	Pre-rRNA processing nucleolar protein.	0.994
ARAM_000289	ARAM_003081	A0A0F8V4K2	A0A0F8WFE0	PUA domain-containing protein.	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	0.473
ARAM_000289	ARAM_005434	A0A0F8V4K2	A0A0F8UKC4	PUA domain-containing protein.	Nop domain-containing protein.	0.992
ARAM_000289	ARAM_005456	A0A0F8V4K2	A0A0F8WA88	PUA domain-containing protein.	Uncharacterized protein.	0.988
ARAM_000289	ARAM_006224	A0A0F8V4K2	A0A0F8WWA5	PUA domain-containing protein.	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.999
ARAM_000330	ARAM_000289	A0A0F8UMA1	A0A0F8V4K2	rRNA processing protein.	PUA domain-containing protein.	0.531
ARAM_000330	ARAM_000763	A0A0F8UMA1	A0A0F8UEN3	rRNA processing protein.	rRNA methyltransferase NOP1.	0.999
ARAM_000330	ARAM_002308	A0A0F8UMA1	A0A0F8W6G5	rRNA processing protein.	Ribosomal_L7Ae domain-containing protein.	0.948