(10 nodes) Regulation of macroautophagy network (Aspergillus rambellii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ARAM_004062	Uncharacterized protein. (879 aa)
	ARAM_007719	Uncharacterized protein. (368 aa)
	ARAM_001917	TYR_PHOSPHATASE_2 domain-containing protein. (612 aa)
	ARAM_001588	Uncharacterized protein. (751 aa)
	ARAM_003732	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2372 aa)
	ARAM_000830	Protein-serine/threonine kinase. (440 aa)
	ARAM_005626	Sorting nexin-4. (484 aa)
	ARAM_005483	Protein kinase domain-containing protein. (847 aa)
	ARAM_006972	Putative bZIP transcription factor. (168 aa)
	ARAM_005445	Protein-serine/threonine kinase. (530 aa)

Your Current Organism:

Aspergillus rambellii

NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARAM_001588	ARAM_003732	A0A0F8U2M0	A0A0F8U6Z7	Uncharacterized protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.897
ARAM_001588	ARAM_005483	A0A0F8U2M0	A0A0F8V0S3	Uncharacterized protein.	Protein kinase domain-containing protein.	0.627
ARAM_003732	ARAM_001588	A0A0F8U6Z7	A0A0F8U2M0	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.897
ARAM_003732	ARAM_005483	A0A0F8U6Z7	A0A0F8V0S3	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	Protein kinase domain-containing protein.	0.897
ARAM_005483	ARAM_001588	A0A0F8V0S3	A0A0F8U2M0	Protein kinase domain-containing protein.	Uncharacterized protein.	0.627
ARAM_005483	ARAM_003732	A0A0F8V0S3	A0A0F8U6Z7	Protein kinase domain-containing protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.897