(64 nodes) Carbon-carbon lyase activity network (Aspergillus rambellii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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protein homology

Your Input:
	ARAM_001365	Putative C6 transcription factor. (710 aa)
	PSD1	Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily. (541 aa)
	ARAM_000561	Aromatic-L-amino-acid decarboxylase. (517 aa)
	ARAM_000222	Uncharacterized protein. (536 aa)
	ARAM_001836	Deoxyribodipyrimidine photo-lyase. (587 aa)
	FDC1	Ferulic acid decarboxylase 1; Catalyzes the reversible decarboxylation of aromatic carboxylic acids like ferulic acid, p-coumaric acid or cinnamic acid, producing the corresponding vinyl derivatives 4-vinylphenol, 4- vinylguaiacol, and styrene, respectively, which play the role of aroma metabolites; Belongs to the UbiD family. UbiD-like/FDC subfamily. (497 aa)
	ARAM_002732	Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. (360 aa)
	ARAM_005182	Dihydrodipicolinate synthase-like protein; Belongs to the DapA family. (340 aa)
	ARAM_004109	PKS_ER domain-containing protein; Belongs to the zinc-containing alcohol dehydrogenase family. (963 aa)
	ARAM_001108	Uncharacterized protein. (483 aa)
	ARAM_001107	Fungal_trans domain-containing protein. (594 aa)
	ARAM_006737	Pyruvate carboxyltransferase domain-containing protein. (297 aa)
	ARAM_006868	Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family. (405 aa)
	ARAM_004224	Isocitrate lyase. (607 aa)
	ARAM_005743	OMPdecase domain-containing protein. (458 aa)
	ARAM_001906	Uncharacterized protein. (535 aa)
	ARAM_006096	XFP_C domain-containing protein. (66 aa)
	ARAM_000138	C6 zinc finger domain protein. (612 aa)
	ARAM_005953	Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. (251 aa)
	ARAM_000475	Putative 2-hydroxyphytanoyl-CoA lyase; Belongs to the TPP enzyme family. (603 aa)
	ARAM_005918	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (434 aa)
	ARAM_000968	Uncharacterized protein. (557 aa)
	ARAM_002990	Hydroxymethylglutaryl-CoA lyase. (356 aa)
	ARAM_000392	Uncharacterized protein. (759 aa)
	ARAM_006591	Amidohydrolase family protein; Belongs to the metallo-dependent hydrolases superfamily. (338 aa)
	PAD1	Flavin prenyltransferase PAD1, mitochondrial; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for the ferulic acid decarboxylase FDC1. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (223 aa)
	ARAM_002295	Uncharacterized protein. (197 aa)
	ARAM_005271	DlpA domain protein. (238 aa)
	ARAM_003385	Putative 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Belongs to the metallo-dependent hydrolases superfamily. (355 aa)
	ARAM_002722	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. (761 aa)
	ARAM_004091	Elp3 domain-containing protein. (694 aa)
	ARAM_006320	PKS_ER domain-containing protein. (1586 aa)
	ARAM_003037	Uroporphyrinogen decarboxylase. (378 aa)
	ARAM_001968	Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. Belongs to the HisA/HisF family. (553 aa)
	ARAM_005530	Uncharacterized protein. (263 aa)
	ARAM_003865	Citrate lyase beta subunit. (330 aa)
	PSD2	Phosphatidylserine decarboxylase 2 alpha chain; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type II sub-subfamily. (1102 aa)
	ARAM_000044	Folic acid synthesis protein. (464 aa)
	ARAM_002010	Pyruvate carboxyltransferase domain-containing protein. (964 aa)
	ARAM_001339	Amidohydro-rel domain-containing protein; Belongs to the metallo-dependent hydrolases superfamily. (382 aa)
	ARAM_001367	Uncharacterized protein. (286 aa)
	ARAM_001875	Pyruvate decarboxylase. (571 aa)
	ARAM_001870	Putative glutamate decarboxylase. (567 aa)
	ARAM_004923	Phosphoenolpyruvate carboxykinase AcuF. (601 aa)
	ARAM_001105	Oxaloacetate hydrolase class protein. (299 aa)
	ARAM_006053	Zn(2)-C6 fungal-type domain-containing protein. (825 aa)
	ARAM_004705	Uncharacterized protein; Belongs to the DapA family. (311 aa)
	ARAM_004344	Uncharacterized protein. (97 aa)
	ARAM_000410	Uncharacterized protein. (267 aa)
	ARAM_007240	3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. (235 aa)
	ARAM_003290	Stress responsive A/B barrel domain protein. (81 aa)
	ARAM_005945	Isocitrate lyase. (538 aa)
	ARAM_004528	Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. (410 aa)
	ARAM_006097	Phosphoketolase. (727 aa)
	ARAM_003769	Uncharacterized protein. (329 aa)
	ARAM_004194	Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily. (572 aa)
	ARAM_005952	Uncharacterized protein. (440 aa)
	ARAM_007538	Putative anthranilate synthase component I. (514 aa)
	ARAM_002044	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (515 aa)
	ARAM_004266	Flavodoxin-like domain-containing protein. (780 aa)
	ARAM_001942	Putative tyrosine decarboxylase. (507 aa)
	ARAM_006563	Beta_elim_lyase domain-containing protein. (413 aa)
	ARAM_005024	Uncharacterized protein. (3312 aa)
	ARAM_001506	Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (444 aa)

Your Current Organism:

Aspergillus rambellii

NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARAM_000044	ARAM_002722	A0A0F8VV29	A0A0F8VCE5	Folic acid synthesis protein.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.760
ARAM_000044	ARAM_005530	A0A0F8VV29	A0A0F8VMX4	Folic acid synthesis protein.	Uncharacterized protein.	0.908
ARAM_000044	ARAM_007538	A0A0F8VV29	A0A0F8X627	Folic acid synthesis protein.	Putative anthranilate synthase component I.	0.777
ARAM_000222	ARAM_000475	A0A0F8U307	A0A0F8V273	Uncharacterized protein.	Putative 2-hydroxyphytanoyl-CoA lyase; Belongs to the TPP enzyme family.	0.453
ARAM_000222	ARAM_000561	A0A0F8U307	A0A0F8U0Z3	Uncharacterized protein.	Aromatic-L-amino-acid decarboxylase.	0.526
ARAM_000222	ARAM_001506	A0A0F8U307	A0A0F8XJR7	Uncharacterized protein.	Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.418
ARAM_000222	ARAM_001870	A0A0F8U307	A0A0F8WP14	Uncharacterized protein.	Putative glutamate decarboxylase.	0.741
ARAM_000222	ARAM_001942	A0A0F8U307	A0A0F8XCN3	Uncharacterized protein.	Putative tyrosine decarboxylase.	0.515
ARAM_000392	ARAM_001105	A0A0F8V4P2	A0A0F8WS78	Uncharacterized protein.	Oxaloacetate hydrolase class protein.	0.550
ARAM_000392	ARAM_001365	A0A0F8V4P2	A0A0F8TXU8	Uncharacterized protein.	Putative C6 transcription factor.	0.550
ARAM_000392	ARAM_002722	A0A0F8V4P2	A0A0F8VCE5	Uncharacterized protein.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.464
ARAM_000392	ARAM_002732	A0A0F8V4P2	A0A0F8UGQ3	Uncharacterized protein.	Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.	0.836
ARAM_000392	ARAM_004224	A0A0F8V4P2	A0A0F8USR4	Uncharacterized protein.	Isocitrate lyase.	0.550
ARAM_000392	ARAM_005945	A0A0F8V4P2	A0A0F8X1W5	Uncharacterized protein.	Isocitrate lyase.	0.574
ARAM_000392	ARAM_005952	A0A0F8V4P2	A0A0F8X5T4	Uncharacterized protein.	Uncharacterized protein.	0.766
ARAM_000392	ARAM_005953	A0A0F8V4P2	A0A0F8UZS1	Uncharacterized protein.	Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.	0.766
ARAM_000410	ARAM_001506	A0A0F8WYR5	A0A0F8XJR7	Uncharacterized protein.	Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.531
ARAM_000410	ARAM_002732	A0A0F8WYR5	A0A0F8UGQ3	Uncharacterized protein.	Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.	0.901
ARAM_000410	ARAM_005271	A0A0F8WYR5	A0A0F8V6I4	Uncharacterized protein.	DlpA domain protein.	0.550
ARAM_000410	ARAM_005952	A0A0F8WYR5	A0A0F8X5T4	Uncharacterized protein.	Uncharacterized protein.	0.772