(16 nodes) Clathrin binding network (Aspergillus rambellii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ARAM_007074	EH domain binding protein. (543 aa)
	ARAM_005170	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (446 aa)
	ARAM_004508	AP-1 complex subunit gamma. (845 aa)
	ARAM_007750	AP-2 complex subunit alpha. (150 aa)
	ARAM_000110	Cytoskeleton assembly control protein. (1064 aa)
	ARAM_007002	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1677 aa)
	ARAM_001292	Rad60-SLD_2 domain-containing protein. (251 aa)
	ARAM_004009	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (746 aa)
	ARAM_005721	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (717 aa)
	ARAM_005566	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (154 aa)
	ARAM_001469	UBA domain-containing protein. (848 aa)
	ARAM_005418	Putative AP-2 adaptor complex subunit alpha. (789 aa)
	ARAM_005394	ENTH domain-containing protein. (536 aa)
	ARAM_006582	Putative AP-2 adaptor complex subunit mu; Belongs to the adaptor complexes medium subunit family. (455 aa)
	ARAM_002575	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (237 aa)
	ARAM_006165	ENTH domain protein. (599 aa)

Your Current Organism:

Aspergillus rambellii

NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARAM_000110	ARAM_001292	A0A0F8XMZ1	A0A0F8XUD0	Cytoskeleton assembly control protein.	Rad60-SLD_2 domain-containing protein.	0.653
ARAM_000110	ARAM_001469	A0A0F8XMZ1	A0A0F8V4L1	Cytoskeleton assembly control protein.	UBA domain-containing protein.	0.795
ARAM_000110	ARAM_002575	A0A0F8XMZ1	A0A0F8XGI8	Cytoskeleton assembly control protein.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.969
ARAM_000110	ARAM_004009	A0A0F8XMZ1	A0A0F8V134	Cytoskeleton assembly control protein.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.653
ARAM_000110	ARAM_004508	A0A0F8XMZ1	A0A0F8UJR2	Cytoskeleton assembly control protein.	AP-1 complex subunit gamma.	0.709
ARAM_000110	ARAM_005170	A0A0F8XMZ1	A0A0F8UCH9	Cytoskeleton assembly control protein.	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.694
ARAM_000110	ARAM_005394	A0A0F8XMZ1	A0A0F8XAM0	Cytoskeleton assembly control protein.	ENTH domain-containing protein.	0.746
ARAM_000110	ARAM_005418	A0A0F8XMZ1	A0A0F8V9P0	Cytoskeleton assembly control protein.	Putative AP-2 adaptor complex subunit alpha.	0.744
ARAM_000110	ARAM_005566	A0A0F8XMZ1	A0A0F8V433	Cytoskeleton assembly control protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.683
ARAM_000110	ARAM_005721	A0A0F8XMZ1	A0A0F8V3R9	Cytoskeleton assembly control protein.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.653
ARAM_000110	ARAM_006165	A0A0F8XMZ1	A0A0F8XJ01	Cytoskeleton assembly control protein.	ENTH domain protein.	0.900
ARAM_000110	ARAM_006582	A0A0F8XMZ1	A0A0F8XEG8	Cytoskeleton assembly control protein.	Putative AP-2 adaptor complex subunit mu; Belongs to the adaptor complexes medium subunit family.	0.678
ARAM_000110	ARAM_007002	A0A0F8XMZ1	A0A0F8XRA5	Cytoskeleton assembly control protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.968
ARAM_000110	ARAM_007074	A0A0F8XMZ1	A0A0F8UBS7	Cytoskeleton assembly control protein.	EH domain binding protein.	0.911
ARAM_000110	ARAM_007750	A0A0F8XMZ1	A0A0F8UX57	Cytoskeleton assembly control protein.	AP-2 complex subunit alpha.	0.744
ARAM_001292	ARAM_000110	A0A0F8XUD0	A0A0F8XMZ1	Rad60-SLD_2 domain-containing protein.	Cytoskeleton assembly control protein.	0.653
ARAM_001292	ARAM_001469	A0A0F8XUD0	A0A0F8V4L1	Rad60-SLD_2 domain-containing protein.	UBA domain-containing protein.	0.585
ARAM_001292	ARAM_002575	A0A0F8XUD0	A0A0F8XGI8	Rad60-SLD_2 domain-containing protein.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.852
ARAM_001292	ARAM_004508	A0A0F8XUD0	A0A0F8UJR2	Rad60-SLD_2 domain-containing protein.	AP-1 complex subunit gamma.	0.953
ARAM_001292	ARAM_005170	A0A0F8XUD0	A0A0F8UCH9	Rad60-SLD_2 domain-containing protein.	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.943