15 items (Aspergillus rambellii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ARAM_006209	Putative exosome complex exonuclease Rrp40. (273 aa)
	ARAM_004903	RNA polymerase II transcription elongation factor Rtf1p. (607 aa)
	ARAM_003986	RRM domain-containing protein. (557 aa)
	ARAM_004833	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (599 aa)
	ARAM_000289	PUA domain-containing protein. (779 aa)
	ARAM_000714	Uncharacterized protein. (736 aa)
	ARAM_006605	HAD_SAK_1 domain-containing protein. (589 aa)
	ARAM_005129	Putative exosome complex subunit Rrp46. (249 aa)
	ARAM_007625	Exosome component 3'-5' exonuclease. (787 aa)
	ARAM_005804	RNase_PH domain-containing protein. (276 aa)
	ARAM_005434	Nop domain-containing protein. (584 aa)
	ARAM_004781	Putative cleavage and polyadenylation specifity factor, 73 kDa subunit. (874 aa)
	ARAM_000763	rRNA methyltransferase NOP1. (316 aa)
	ARAM_003987	RNA-binding protein. (275 aa)
	ARAM_002363	Exosome complex component rrp4. (385 aa)

Your Current Organism:

Aspergillus rambellii

NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARAM_000289	ARAM_000763	A0A0F8V4K2	A0A0F8UEN3	PUA domain-containing protein.	rRNA methyltransferase NOP1.	0.996
ARAM_000289	ARAM_005434	A0A0F8V4K2	A0A0F8UKC4	PUA domain-containing protein.	Nop domain-containing protein.	0.992
ARAM_000714	ARAM_003986	A0A0F8UZ26	A0A0F8XC97	Uncharacterized protein.	RRM domain-containing protein.	0.470
ARAM_000714	ARAM_003987	A0A0F8UZ26	A0A0F8VDR8	Uncharacterized protein.	RNA-binding protein.	0.470
ARAM_000714	ARAM_004781	A0A0F8UZ26	A0A0F8V8B2	Uncharacterized protein.	Putative cleavage and polyadenylation specifity factor, 73 kDa subunit.	0.421
ARAM_000763	ARAM_000289	A0A0F8UEN3	A0A0F8V4K2	rRNA methyltransferase NOP1.	PUA domain-containing protein.	0.996
ARAM_000763	ARAM_002363	A0A0F8UEN3	A0A0F8VN03	rRNA methyltransferase NOP1.	Exosome complex component rrp4.	0.849
ARAM_000763	ARAM_005129	A0A0F8UEN3	A0A0F8UQC3	rRNA methyltransferase NOP1.	Putative exosome complex subunit Rrp46.	0.852
ARAM_000763	ARAM_005434	A0A0F8UEN3	A0A0F8UKC4	rRNA methyltransferase NOP1.	Nop domain-containing protein.	0.999
ARAM_000763	ARAM_005804	A0A0F8UEN3	A0A0F8UNI0	rRNA methyltransferase NOP1.	RNase_PH domain-containing protein.	0.854
ARAM_002363	ARAM_000763	A0A0F8VN03	A0A0F8UEN3	Exosome complex component rrp4.	rRNA methyltransferase NOP1.	0.849
ARAM_002363	ARAM_005129	A0A0F8VN03	A0A0F8UQC3	Exosome complex component rrp4.	Putative exosome complex subunit Rrp46.	0.999
ARAM_002363	ARAM_005434	A0A0F8VN03	A0A0F8UKC4	Exosome complex component rrp4.	Nop domain-containing protein.	0.869
ARAM_002363	ARAM_005804	A0A0F8VN03	A0A0F8UNI0	Exosome complex component rrp4.	RNase_PH domain-containing protein.	0.999
ARAM_002363	ARAM_006209	A0A0F8VN03	A0A0F8U7C1	Exosome complex component rrp4.	Putative exosome complex exonuclease Rrp40.	0.900
ARAM_002363	ARAM_007625	A0A0F8VN03	A0A0F8UQ72	Exosome complex component rrp4.	Exosome component 3'-5' exonuclease.	0.460
ARAM_003986	ARAM_000714	A0A0F8XC97	A0A0F8UZ26	RRM domain-containing protein.	Uncharacterized protein.	0.470
ARAM_003986	ARAM_003987	A0A0F8XC97	A0A0F8VDR8	RRM domain-containing protein.	RNA-binding protein.	0.926
ARAM_003987	ARAM_000714	A0A0F8VDR8	A0A0F8UZ26	RNA-binding protein.	Uncharacterized protein.	0.470
ARAM_003987	ARAM_003986	A0A0F8VDR8	A0A0F8XC97	RNA-binding protein.	RRM domain-containing protein.	0.926