41 items (Aspergillus rambellii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ARAM_004025	Sas10 domain-containing protein. (662 aa)
	ARAM_002454	Uncharacterized protein. (902 aa)
	ARAM_001664	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (338 aa)
	ARAM_000934	Uncharacterized protein. (961 aa)
	ARAM_003809	WD_REPEATS_REGION domain-containing protein. (583 aa)
	ARAM_005158	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (366 aa)
	ARAM_006665	WD_REPEATS_REGION domain-containing protein. (941 aa)
	ARAM_000873	HMG box domain-containing protein. (318 aa)
	ARAM_003815	WD_REPEATS_REGION domain-containing protein. (1025 aa)
	ARAM_001744	Uncharacterized protein. (378 aa)
	ARAM_007493	S4 RNA-binding domain-containing protein. (188 aa)
	ARAM_000736	Uncharacterized protein. (303 aa)
	ARAM_002520	WD_REPEATS_REGION domain-containing protein. (352 aa)
	ARAM_002525	ATP-dependent RNA helicase. (447 aa)
	ARAM_002779	Pre-rRNA processing nucleolar protein. (500 aa)
	ARAM_000660	U3 small nucleolar RNA-associated protein 22. (1101 aa)
	ARAM_003984	rRNA processing protein. (396 aa)
	ARAM_004303	WD_REPEATS_REGION domain-containing protein. (946 aa)
	ARAM_007304	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (269 aa)
	ARAM_003081	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (689 aa)
	ARAM_000492	Ribosome biogenesis protein. (551 aa)
	ARAM_007389	Small nucleolar ribonucleoprotein. (902 aa)
	ARAM_000326	WD_REPEATS_REGION domain-containing protein. (977 aa)
	ARAM_005873	Uncharacterized protein. (1816 aa)
	ARAM_001643	rRNA-processing protein. (190 aa)
	ARAM_004894	WD_REPEATS_REGION domain-containing protein. (542 aa)
	ARAM_002197	DEAH-box RNA helicase (Dhr1). (1204 aa)
	ARAM_006401	WD_REPEATS_REGION domain-containing protein. (1036 aa)
	ARAM_001042	RNA helicase. (812 aa)
	ARAM_003433	WD_REPEATS_REGION domain-containing protein. (534 aa)
	ARAM_005545	Uncharacterized protein. (824 aa)
	ARAM_006605	HAD_SAK_1 domain-containing protein. (589 aa)
	ARAM_007174	DRIM domain-containing protein. (2605 aa)
	ARAM_005247	Ribosomal protein; Belongs to the universal ribosomal protein uS5 family. (260 aa)
	ARAM_004124	WD repeat protein. (743 aa)
	ARAM_002720	U3 small nucleolar ribonucleoprotein. (299 aa)
	ARAM_000330	rRNA processing protein. (624 aa)
	ARAM_002657	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (116 aa)
	ARAM_005434	Nop domain-containing protein. (584 aa)
	ARAM_004298	rRNA processing protein. (331 aa)
	ARAM_000763	rRNA methyltransferase NOP1. (316 aa)

Your Current Organism:

Aspergillus rambellii

NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARAM_000326	ARAM_000330	A0A0F8VC91	A0A0F8UMA1	WD_REPEATS_REGION domain-containing protein.	rRNA processing protein.	0.997
ARAM_000326	ARAM_000492	A0A0F8VC91	A0A0F8VRJ6	WD_REPEATS_REGION domain-containing protein.	Ribosome biogenesis protein.	0.996
ARAM_000326	ARAM_000660	A0A0F8VC91	A0A0F8WWG5	WD_REPEATS_REGION domain-containing protein.	U3 small nucleolar RNA-associated protein 22.	0.999
ARAM_000326	ARAM_000736	A0A0F8VC91	A0A0F8X394	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.977
ARAM_000326	ARAM_000763	A0A0F8VC91	A0A0F8UEN3	WD_REPEATS_REGION domain-containing protein.	rRNA methyltransferase NOP1.	0.993
ARAM_000326	ARAM_000934	A0A0F8VC91	A0A0F8U099	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.994
ARAM_000326	ARAM_001042	A0A0F8VC91	A0A0F8V0D5	WD_REPEATS_REGION domain-containing protein.	RNA helicase.	0.802
ARAM_000326	ARAM_001643	A0A0F8VC91	A0A0F8V9J4	WD_REPEATS_REGION domain-containing protein.	rRNA-processing protein.	0.985
ARAM_000326	ARAM_001664	A0A0F8VC91	A0A0F8U207	WD_REPEATS_REGION domain-containing protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.994
ARAM_000326	ARAM_001744	A0A0F8VC91	A0A0F8X9C8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.975
ARAM_000326	ARAM_002197	A0A0F8VC91	A0A0F8V1W0	WD_REPEATS_REGION domain-containing protein.	DEAH-box RNA helicase (Dhr1).	0.958
ARAM_000326	ARAM_002454	A0A0F8VC91	A0A0F8UA37	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.994
ARAM_000326	ARAM_002520	A0A0F8VC91	A0A0F8X1S7	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.992
ARAM_000326	ARAM_002525	A0A0F8VC91	A0A0F8X1S0	WD_REPEATS_REGION domain-containing protein.	ATP-dependent RNA helicase.	0.772
ARAM_000326	ARAM_002657	A0A0F8VC91	A0A0F8ULT7	WD_REPEATS_REGION domain-containing protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.967
ARAM_000326	ARAM_002720	A0A0F8VC91	A0A0F8UMM0	WD_REPEATS_REGION domain-containing protein.	U3 small nucleolar ribonucleoprotein.	0.995
ARAM_000326	ARAM_002779	A0A0F8VC91	A0A0F8WYF7	WD_REPEATS_REGION domain-containing protein.	Pre-rRNA processing nucleolar protein.	0.994
ARAM_000326	ARAM_003081	A0A0F8VC91	A0A0F8WFE0	WD_REPEATS_REGION domain-containing protein.	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	0.994
ARAM_000326	ARAM_003433	A0A0F8VC91	A0A0F8UWT7	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.998
ARAM_000326	ARAM_003809	A0A0F8VC91	A0A0F8TXY7	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999