(20 nodes) SAGA-type complex network (Aspergillus rambellii)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

gene neighborhood

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Your Input:
	ARAM_005005	SAGA-associated factor 11; Functions as component of the transcription regulatory histone acetylation (HAT) complex SAGA. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. SAGA acetylates nucleosomal histone H3 to some extent (to form H3K9ac, H3K14ac, H3K18ac and H3K23ac). SAGA interacts with DNA [...] (329 aa)
	ARAM_005772	Uncharacterized protein. (325 aa)
	ARAM_005616	Uncharacterized protein. (348 aa)
	ARAM_007156	TFIID_20kDa domain-containing protein. (590 aa)
	ARAM_005842	Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. (520 aa)
	ARAM_005357	Uncharacterized protein. (642 aa)
	ARAM_007134	S-adenosylmethionine decarboxylase proenzyme. (927 aa)
	ARAM_005563	Putative SAGA-like transcriptional regulatory complex subunit Spt3. (336 aa)
	ARAM_006719	Uncharacterized protein. (715 aa)
	ARAM_000315	Histone acetyltransferase GCN5. (404 aa)
	ARAM_003649	Uncharacterized protein. (392 aa)
	ARAM_004189	Histone acetyltransferase GCN5. (387 aa)
	ARAM_006186	SCA7 domain-containing protein. (404 aa)
	ARAM_005669	Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family. (486 aa)
	ARAM_007379	Uncharacterized protein. (973 aa)
	ARAM_000868	Uncharacterized protein. (663 aa)
	ARAM_007448	Transcription-associated protein; Belongs to the PI3/PI4-kinase family. (3845 aa)
	ARAM_005101	Uncharacterized protein. (364 aa)
	ARAM_003242	SAGA complex component (Sgf29). (486 aa)
	ARAM_003502	Transcriptional activator spt7. (1183 aa)

Your Current Organism:

Aspergillus rambellii

NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARAM_000315	ARAM_000868	A0A0F8VC79	A0A0F8X3X1	Histone acetyltransferase GCN5.	Uncharacterized protein.	0.945
ARAM_000315	ARAM_003242	A0A0F8VC79	A0A0F8XF65	Histone acetyltransferase GCN5.	SAGA complex component (Sgf29).	0.921
ARAM_000315	ARAM_003502	A0A0F8VC79	A0A0F8XTL3	Histone acetyltransferase GCN5.	Transcriptional activator spt7.	0.899
ARAM_000315	ARAM_005005	A0A0F8VC79	A0A0F8TXC7	Histone acetyltransferase GCN5.	SAGA-associated factor 11; Functions as component of the transcription regulatory histone acetylation (HAT) complex SAGA. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. SAGA acetylates nucleosomal histone H3 to some extent (to form H3K9ac, H3K14ac, H3K18ac and H3K23ac). SAGA interacts with DNA [...]	0.598
ARAM_000315	ARAM_005357	A0A0F8VC79	A0A0F8UXB2	Histone acetyltransferase GCN5.	Uncharacterized protein.	0.852
ARAM_000315	ARAM_005563	A0A0F8VC79	A0A0F8V427	Histone acetyltransferase GCN5.	Putative SAGA-like transcriptional regulatory complex subunit Spt3.	0.907
ARAM_000315	ARAM_005616	A0A0F8VC79	A0A0F8UGW8	Histone acetyltransferase GCN5.	Uncharacterized protein.	0.928
ARAM_000315	ARAM_005669	A0A0F8VC79	A0A0F8WRC8	Histone acetyltransferase GCN5.	Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family.	0.937
ARAM_000315	ARAM_005842	A0A0F8VC79	A0A0F8UUT9	Histone acetyltransferase GCN5.	Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.	0.967
ARAM_000315	ARAM_006186	A0A0F8VC79	A0A0F8WLS1	Histone acetyltransferase GCN5.	SCA7 domain-containing protein.	0.939
ARAM_000315	ARAM_006719	A0A0F8VC79	A0A0F8V661	Histone acetyltransferase GCN5.	Uncharacterized protein.	0.632
ARAM_000315	ARAM_007134	A0A0F8VC79	A0A0F8V1Z3	Histone acetyltransferase GCN5.	S-adenosylmethionine decarboxylase proenzyme.	0.788
ARAM_000315	ARAM_007156	A0A0F8VC79	A0A0F8UH87	Histone acetyltransferase GCN5.	TFIID_20kDa domain-containing protein.	0.862
ARAM_000315	ARAM_007448	A0A0F8VC79	A0A0F8X9H7	Histone acetyltransferase GCN5.	Transcription-associated protein; Belongs to the PI3/PI4-kinase family.	0.929
ARAM_000868	ARAM_000315	A0A0F8X3X1	A0A0F8VC79	Uncharacterized protein.	Histone acetyltransferase GCN5.	0.945
ARAM_000868	ARAM_003242	A0A0F8X3X1	A0A0F8XF65	Uncharacterized protein.	SAGA complex component (Sgf29).	0.994
ARAM_000868	ARAM_003502	A0A0F8X3X1	A0A0F8XTL3	Uncharacterized protein.	Transcriptional activator spt7.	0.994
ARAM_000868	ARAM_003649	A0A0F8X3X1	A0A0F8VUM3	Uncharacterized protein.	Uncharacterized protein.	0.927
ARAM_000868	ARAM_004189	A0A0F8X3X1	A0A0F8WLK3	Uncharacterized protein.	Histone acetyltransferase GCN5.	0.945
ARAM_000868	ARAM_005005	A0A0F8X3X1	A0A0F8TXC7	Uncharacterized protein.	SAGA-associated factor 11; Functions as component of the transcription regulatory histone acetylation (HAT) complex SAGA. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. SAGA acetylates nucleosomal histone H3 to some extent (to form H3K9ac, H3K14ac, H3K18ac and H3K23ac). SAGA interacts with DNA [...]	0.864