(14 nodes) Nonfunctional rRNA decay network (Aspergillus rambellii)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	ARAM_000164	Mitotic control protein; Belongs to the RNR ribonuclease family. (1035 aa)
	ARAM_005569	Uncharacterized protein. (863 aa)
	ARAM_007625	Exosome component 3'-5' exonuclease. (787 aa)
	ARAM_005129	Putative exosome complex subunit Rrp46. (249 aa)
	ARAM_005910	Ubiquitin fusion degradation protein. (368 aa)
	ARAM_002076	Putative proteasome regulatory particle subunit Rpt6; Belongs to the AAA ATPase family. (389 aa)
	ARAM_006237	Uncharacterized protein. (1262 aa)
	ARAM_007201	RNase_PH domain-containing protein. (407 aa)
	ARAM_005804	RNase_PH domain-containing protein. (276 aa)
	ARAM_006608	Uncharacterized protein. (263 aa)
	ARAM_006697	Putative exosome complex endonuclease 2. (324 aa)
	ARAM_004388	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (357 aa)
	ARAM_004962	3' exoribonuclease family protein. (376 aa)
	ARAM_004586	MPN domain-containing protein. (652 aa)

Your Current Organism:

Aspergillus rambellii

NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARAM_000164	ARAM_004962	A0A0F8XAM7	A0A0F8WPP8	Mitotic control protein; Belongs to the RNR ribonuclease family.	3' exoribonuclease family protein.	0.995
ARAM_000164	ARAM_005129	A0A0F8XAM7	A0A0F8UQC3	Mitotic control protein; Belongs to the RNR ribonuclease family.	Putative exosome complex subunit Rrp46.	0.994
ARAM_000164	ARAM_005804	A0A0F8XAM7	A0A0F8UNI0	Mitotic control protein; Belongs to the RNR ribonuclease family.	RNase_PH domain-containing protein.	0.996
ARAM_000164	ARAM_006697	A0A0F8XAM7	A0A0F8V0N4	Mitotic control protein; Belongs to the RNR ribonuclease family.	Putative exosome complex endonuclease 2.	0.997
ARAM_000164	ARAM_007201	A0A0F8XAM7	A0A0F8TYH5	Mitotic control protein; Belongs to the RNR ribonuclease family.	RNase_PH domain-containing protein.	0.997
ARAM_000164	ARAM_007625	A0A0F8XAM7	A0A0F8UQ72	Mitotic control protein; Belongs to the RNR ribonuclease family.	Exosome component 3'-5' exonuclease.	0.972
ARAM_002076	ARAM_004586	A0A0F8UE20	A0A0F8X9X1	Putative proteasome regulatory particle subunit Rpt6; Belongs to the AAA ATPase family.	MPN domain-containing protein.	0.626
ARAM_002076	ARAM_005910	A0A0F8UE20	A0A0F8UIS0	Putative proteasome regulatory particle subunit Rpt6; Belongs to the AAA ATPase family.	Ubiquitin fusion degradation protein.	0.757
ARAM_002076	ARAM_007625	A0A0F8UE20	A0A0F8UQ72	Putative proteasome regulatory particle subunit Rpt6; Belongs to the AAA ATPase family.	Exosome component 3'-5' exonuclease.	0.545
ARAM_004586	ARAM_002076	A0A0F8X9X1	A0A0F8UE20	MPN domain-containing protein.	Putative proteasome regulatory particle subunit Rpt6; Belongs to the AAA ATPase family.	0.626
ARAM_004586	ARAM_005910	A0A0F8X9X1	A0A0F8UIS0	MPN domain-containing protein.	Ubiquitin fusion degradation protein.	0.999
ARAM_004962	ARAM_000164	A0A0F8WPP8	A0A0F8XAM7	3' exoribonuclease family protein.	Mitotic control protein; Belongs to the RNR ribonuclease family.	0.995
ARAM_004962	ARAM_005129	A0A0F8WPP8	A0A0F8UQC3	3' exoribonuclease family protein.	Putative exosome complex subunit Rrp46.	0.999
ARAM_004962	ARAM_005804	A0A0F8WPP8	A0A0F8UNI0	3' exoribonuclease family protein.	RNase_PH domain-containing protein.	0.997
ARAM_004962	ARAM_006697	A0A0F8WPP8	A0A0F8V0N4	3' exoribonuclease family protein.	Putative exosome complex endonuclease 2.	0.999
ARAM_004962	ARAM_007201	A0A0F8WPP8	A0A0F8TYH5	3' exoribonuclease family protein.	RNase_PH domain-containing protein.	0.999
ARAM_005129	ARAM_000164	A0A0F8UQC3	A0A0F8XAM7	Putative exosome complex subunit Rrp46.	Mitotic control protein; Belongs to the RNR ribonuclease family.	0.994
ARAM_005129	ARAM_004962	A0A0F8UQC3	A0A0F8WPP8	Putative exosome complex subunit Rrp46.	3' exoribonuclease family protein.	0.999
ARAM_005129	ARAM_005804	A0A0F8UQC3	A0A0F8UNI0	Putative exosome complex subunit Rrp46.	RNase_PH domain-containing protein.	0.999
ARAM_005129	ARAM_006697	A0A0F8UQC3	A0A0F8V0N4	Putative exosome complex subunit Rrp46.	Putative exosome complex endonuclease 2.	0.999