(6 nodes) HOPS complex network (Aspergillus rambellii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ARAM_006507	Vps8 domain-containing protein. (1595 aa)
	ARAM_002893	Uncharacterized protein. (1298 aa)
	ARAM_006038	Pep3_Vps18 domain-containing protein. (965 aa)
	ARAM_004721	E3 ubiquitin-protein ligase PEP5. (956 aa)
	ARAM_000435	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology. (829 aa)
	ARAM_004406	Uncharacterized protein. (231 aa)

Your Current Organism:

Aspergillus rambellii

NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARAM_000435	ARAM_002893	A0A0F8V679	A0A0F8UQT2	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Uncharacterized protein.	0.995
ARAM_000435	ARAM_004721	A0A0F8V679	A0A0F8UZ01	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	E3 ubiquitin-protein ligase PEP5.	0.995
ARAM_000435	ARAM_006038	A0A0F8V679	A0A0F8UU20	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Pep3_Vps18 domain-containing protein.	0.996
ARAM_000435	ARAM_006507	A0A0F8V679	A0A0F8WNJ1	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Vps8 domain-containing protein.	0.898
ARAM_002893	ARAM_000435	A0A0F8UQT2	A0A0F8V679	Uncharacterized protein.	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	0.995
ARAM_002893	ARAM_004721	A0A0F8UQT2	A0A0F8UZ01	Uncharacterized protein.	E3 ubiquitin-protein ligase PEP5.	0.995
ARAM_002893	ARAM_006038	A0A0F8UQT2	A0A0F8UU20	Uncharacterized protein.	Pep3_Vps18 domain-containing protein.	0.995
ARAM_002893	ARAM_006507	A0A0F8UQT2	A0A0F8WNJ1	Uncharacterized protein.	Vps8 domain-containing protein.	0.644
ARAM_004721	ARAM_000435	A0A0F8UZ01	A0A0F8V679	E3 ubiquitin-protein ligase PEP5.	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	0.995
ARAM_004721	ARAM_002893	A0A0F8UZ01	A0A0F8UQT2	E3 ubiquitin-protein ligase PEP5.	Uncharacterized protein.	0.995
ARAM_004721	ARAM_006038	A0A0F8UZ01	A0A0F8UU20	E3 ubiquitin-protein ligase PEP5.	Pep3_Vps18 domain-containing protein.	0.996
ARAM_004721	ARAM_006507	A0A0F8UZ01	A0A0F8WNJ1	E3 ubiquitin-protein ligase PEP5.	Vps8 domain-containing protein.	0.987
ARAM_006038	ARAM_000435	A0A0F8UU20	A0A0F8V679	Pep3_Vps18 domain-containing protein.	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	0.996
ARAM_006038	ARAM_002893	A0A0F8UU20	A0A0F8UQT2	Pep3_Vps18 domain-containing protein.	Uncharacterized protein.	0.995
ARAM_006038	ARAM_004721	A0A0F8UU20	A0A0F8UZ01	Pep3_Vps18 domain-containing protein.	E3 ubiquitin-protein ligase PEP5.	0.996
ARAM_006038	ARAM_006507	A0A0F8UU20	A0A0F8WNJ1	Pep3_Vps18 domain-containing protein.	Vps8 domain-containing protein.	0.987
ARAM_006507	ARAM_000435	A0A0F8WNJ1	A0A0F8V679	Vps8 domain-containing protein.	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	0.898
ARAM_006507	ARAM_002893	A0A0F8WNJ1	A0A0F8UQT2	Vps8 domain-containing protein.	Uncharacterized protein.	0.644
ARAM_006507	ARAM_004721	A0A0F8WNJ1	A0A0F8UZ01	Vps8 domain-containing protein.	E3 ubiquitin-protein ligase PEP5.	0.987
ARAM_006507	ARAM_006038	A0A0F8WNJ1	A0A0F8UU20	Vps8 domain-containing protein.	Pep3_Vps18 domain-containing protein.	0.987