(15 nodes) Zinc finger, PHD-type, conserved site network (Aspergillus rambellii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ARAM_000618	PHD-type domain-containing protein. (763 aa)
	ARAM_000148	PHD finger domain protein. (829 aa)
	ARAM_005789	PHD finger domain protein. (1174 aa)
	ARAM_002522	PHD-type domain-containing protein. (1065 aa)
	ARAM_000824	PHD transcription factor (Rum1). (1619 aa)
	ARAM_003519	PHD and RING finger domain protein. (619 aa)
	ARAM_002020	PHD-type domain-containing protein. (299 aa)
	ARAM_004246	Uncharacterized protein. (923 aa)
	ARAM_005260	Chromatin modification-related protein. (423 aa)
	ARAM_005184	Chromatin modification-related protein. (716 aa)
	ARAM_001909	PHD-type domain-containing protein. (887 aa)
	ARAM_004141	Uncharacterized protein. (1469 aa)
	ARAM_003811	Uncharacterized protein. (1430 aa)
	ARAM_005650	Chromatin modification-related protein. (597 aa)
	ARAM_003513	Uncharacterized protein. (854 aa)

Your Current Organism:

Aspergillus rambellii

NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARAM_000148	ARAM_000618	A0A0F8UMC6	A0A0F8UMX3	PHD finger domain protein.	PHD-type domain-containing protein.	0.536
ARAM_000148	ARAM_004141	A0A0F8UMC6	A0A0F8WP29	PHD finger domain protein.	Uncharacterized protein.	0.414
ARAM_000618	ARAM_000148	A0A0F8UMX3	A0A0F8UMC6	PHD-type domain-containing protein.	PHD finger domain protein.	0.536
ARAM_000824	ARAM_003513	A0A0F8U2B5	A0A0F8URM5	PHD transcription factor (Rum1).	Uncharacterized protein.	0.868
ARAM_000824	ARAM_003811	A0A0F8U2B5	A0A0F8WLN5	PHD transcription factor (Rum1).	Uncharacterized protein.	0.664
ARAM_001909	ARAM_003811	A0A0F8WVE0	A0A0F8WLN5	PHD-type domain-containing protein.	Uncharacterized protein.	0.416
ARAM_002020	ARAM_003513	A0A0F8U6K3	A0A0F8URM5	PHD-type domain-containing protein.	Uncharacterized protein.	0.610
ARAM_002020	ARAM_003811	A0A0F8U6K3	A0A0F8WLN5	PHD-type domain-containing protein.	Uncharacterized protein.	0.653
ARAM_003513	ARAM_000824	A0A0F8URM5	A0A0F8U2B5	Uncharacterized protein.	PHD transcription factor (Rum1).	0.868
ARAM_003513	ARAM_002020	A0A0F8URM5	A0A0F8U6K3	Uncharacterized protein.	PHD-type domain-containing protein.	0.610
ARAM_003811	ARAM_000824	A0A0F8WLN5	A0A0F8U2B5	Uncharacterized protein.	PHD transcription factor (Rum1).	0.664
ARAM_003811	ARAM_001909	A0A0F8WLN5	A0A0F8WVE0	Uncharacterized protein.	PHD-type domain-containing protein.	0.416
ARAM_003811	ARAM_002020	A0A0F8WLN5	A0A0F8U6K3	Uncharacterized protein.	PHD-type domain-containing protein.	0.653
ARAM_003811	ARAM_004141	A0A0F8WLN5	A0A0F8WP29	Uncharacterized protein.	Uncharacterized protein.	0.668
ARAM_004141	ARAM_000148	A0A0F8WP29	A0A0F8UMC6	Uncharacterized protein.	PHD finger domain protein.	0.414
ARAM_004141	ARAM_003811	A0A0F8WP29	A0A0F8WLN5	Uncharacterized protein.	Uncharacterized protein.	0.668
ARAM_004141	ARAM_005184	A0A0F8WP29	A0A0F8X7N8	Uncharacterized protein.	Chromatin modification-related protein.	0.701
ARAM_004141	ARAM_005260	A0A0F8WP29	A0A0F8X8N5	Uncharacterized protein.	Chromatin modification-related protein.	0.525
ARAM_004141	ARAM_005650	A0A0F8WP29	A0A0F8UU64	Uncharacterized protein.	Chromatin modification-related protein.	0.525
ARAM_004141	ARAM_005789	A0A0F8WP29	A0A0F8UES5	Uncharacterized protein.	PHD finger domain protein.	0.690