138 items (Aspergillus rambellii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ARAM_007639	Uncharacterized protein. (65 aa)
	ARAM_004870	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (119 aa)
	ARAM_003433	WD_REPEATS_REGION domain-containing protein. (534 aa)
	ARAM_001971	21S rRNA (Uridine(2791)-2'-O)-methyltransferase MRM2. (305 aa)
	ARAM_006832	Uncharacterized protein. (198 aa)
	ARAM_000409	WD_REPEATS_REGION domain-containing protein. (553 aa)
	ARAM_006401	WD_REPEATS_REGION domain-containing protein. (1036 aa)
	ARAM_006697	Putative exosome complex endonuclease 2. (324 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (729 aa)
	ARAM_005206	Uncharacterized protein. (404 aa)
	ARAM_002197	DEAH-box RNA helicase (Dhr1). (1204 aa)
	ARAM_002758	Uncharacterized protein. (341 aa)
	ARAM_000961	Utp12 domain-containing protein. (847 aa)
	ARAM_005713	40S ribosomal protein; Belongs to the universal ribosomal protein uS11 family. (49 aa)
	ARAM_004694	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1029 aa)
	ARAM_000393	Mitochondrial 37S ribosomal protein. (461 aa)
	ARAM_002369	40S ribosomal protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	ARAM_003736	40S ribosomal protein; Belongs to the universal ribosomal protein uS7 family. (283 aa)
	ARAM_004894	WD_REPEATS_REGION domain-containing protein. (542 aa)
	ARAM_003015	40S ribosomal protein; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	ARAM_007746	40S ribosomal protein. (60 aa)
	ARAM_006264	Ipi1_N domain-containing protein. (349 aa)
	ARAM_003480	40S ribosomal protein. (56 aa)
	ARAM_007777	40S ribosomal protein; Belongs to the eukaryotic ribosomal protein eS1 family. (113 aa)
	ARAM_001643	rRNA-processing protein. (190 aa)
	ARAM_005444	Ribosome biogenesis protein. (1190 aa)
	ARAM_005873	Uncharacterized protein. (1816 aa)
	ARAM_000168	Uncharacterized protein. (388 aa)
	ARAM_000326	WD_REPEATS_REGION domain-containing protein. (977 aa)
	ARAM_005222	KH domain-containing protein. (258 aa)
	ARAM_001253	3' exoribonuclease family protein. (324 aa)
	ARAM_002218	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (400 aa)
	ARAM_007105	40S ribosomal protein. (206 aa)
	ARAM_005620	Dynactin subunit. (476 aa)
	ARAM_007785	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (44 aa)
	ARAM_002363	Exosome complex component rrp4. (385 aa)
	ARAM_007389	Small nucleolar ribonucleoprotein. (902 aa)
	ARAM_002036	BP28CT domain-containing protein. (1804 aa)
	ARAM_000492	Ribosome biogenesis protein. (551 aa)
	ARAM_004846	RNA processing protein. (255 aa)
	ARAM_005939	Uncharacterized protein. (539 aa)
	ARAM_006754	Uncharacterized protein; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. (314 aa)
	ARAM_000359	Mitochondrial 37S ribosomal protein. (170 aa)
	ARAM_001242	Uncharacterized protein. (495 aa)
	ARAM_004933	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (174 aa)
	ARAM_004559	Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (570 aa)
	ARAM_000827	ULP_PROTEASE domain-containing protein. (1148 aa)
	ARAM_006033	Uncharacterized protein. (496 aa)
	ARAM_002792	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (431 aa)
	ARAM_007807	40S ribosomal protein. (81 aa)
	ARAM_003081	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (689 aa)
	ARAM_005286	Putative nucleolar ATPase Kre33. (1087 aa)
	ARAM_001626	Ribosomal_S10 domain-containing protein. (115 aa)
	ARAM_001886	Uncharacterized protein. (636 aa)
	ARAM_007304	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (269 aa)
	ARAM_004303	WD_REPEATS_REGION domain-containing protein. (946 aa)
	ARAM_000938	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (448 aa)
	ARAM_004962	3' exoribonuclease family protein. (376 aa)
	ARAM_005837	40S ribosomal protein. (139 aa)
	ARAM_003984	rRNA processing protein. (396 aa)
	ARAM_000660	U3 small nucleolar RNA-associated protein 22. (1101 aa)
	ARAM_001436	Exonuclease domain-containing protein. (942 aa)
	ARAM_002779	Pre-rRNA processing nucleolar protein. (500 aa)
	ARAM_001814	ULP_PROTEASE domain-containing protein. (994 aa)
	ARAM_006163	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (160 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (790 aa)
	ARAM_002525	ATP-dependent RNA helicase. (447 aa)
	ARAM_002520	WD_REPEATS_REGION domain-containing protein. (352 aa)
	ARAM_003432	Bms1-type G domain-containing protein. (805 aa)
	ARAM_000736	Uncharacterized protein. (303 aa)
	ARAM_006459	Uncharacterized protein. (232 aa)
	ARAM_003186	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
	ARAM_007493	S4 RNA-binding domain-containing protein. (188 aa)
	ARAM_002049	40S ribosomal protein; Belongs to the universal ribosomal protein uS13 family. (98 aa)
	ARAM_001744	Uncharacterized protein. (378 aa)
	ARAM_003815	WD_REPEATS_REGION domain-containing protein. (1025 aa)
	ARAM_006755	Putative ATP dependent RNA helicase (Dob1). (1088 aa)
	ARAM_003462	Putative ribonuclease P complex subunit Pop2. (310 aa)
	ARAM_006063	GTP-binding protein. (546 aa)
	ARAM_000021	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family. (153 aa)
	ARAM_004927	Uncharacterized protein. (324 aa)
	ARAM_003258	40S ribosomal protein. (149 aa)
	ARAM_005507	BZIP domain-containing protein. (1863 aa)
	ARAM_006146	60S ribosomal protein. (116 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (878 aa)
	ARAM_000311	40S ribosomal protein. (251 aa)
	ARAM_006985	40S ribosomal protein. (105 aa)
	ARAM_002815	60S ribosomal protein. (239 aa)
	ARAM_000440	Exosome complex subunit Csl4. (245 aa)
	ARAM_006665	WD_REPEATS_REGION domain-containing protein. (941 aa)
	ARAM_003809	WD_REPEATS_REGION domain-containing protein. (583 aa)
	ARAM_002340	Uncharacterized protein. (202 aa)
	ARAM_007201	RNase_PH domain-containing protein. (407 aa)
	ARAM_005350	ATP-dependent RNA helicase dbp8; Belongs to the DEAD box helicase family. (529 aa)
	ARAM_000934	Uncharacterized protein. (961 aa)
	ARAM_006871	40S ribosomal protein; Belongs to the universal ribosomal protein uS9 family. (120 aa)
	ARAM_003520	60S ribosomal protein. (92 aa)
	ARAM_001664	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (338 aa)
	ARAM_006907	Putative pectate lyase. (234 aa)
	ARAM_006209	Putative exosome complex exonuclease Rrp40. (273 aa)
	ARAM_002454	Uncharacterized protein. (902 aa)
	ARAM_000430	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (261 aa)
	ARAM_005763	RIX1 domain-containing protein. (801 aa)
	ARAM_006901	Uncharacterized protein. (225 aa)
	ARAM_003938	Uncharacterized protein. (226 aa)
	ARAM_007383	Uncharacterized protein. (310 aa)
	ARAM_004025	Sas10 domain-containing protein. (662 aa)
	ARAM_001359	Uncharacterized protein. (386 aa)
	ARAM_005153	Uncharacterized protein. (727 aa)
	ARAM_000763	rRNA methyltransferase NOP1. (316 aa)
	ARAM_001622	CLP1_P domain-containing protein. (814 aa)
	ARAM_006654	Uncharacterized protein. (279 aa)
	ARAM_003005	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (647 aa)
	ARAM_001892	40S ribosomal protein; Belongs to the universal ribosomal protein uS4 family. (192 aa)
	ARAM_004140	SpoU_sub_bind domain-containing protein. (502 aa)
	ARAM_004133	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (237 aa)
	ARAM_005434	Nop domain-containing protein. (584 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (292 aa)
	ARAM_003216	Uncharacterized protein. (81 aa)
	ARAM_003098	Uncharacterized protein. (415 aa)
	ARAM_002657	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (116 aa)
	ARAM_000330	rRNA processing protein. (624 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (1323 aa)
	ARAM_000317	Putative mitochondrial 37S ribosomal protein; Belongs to the universal ribosomal protein uS13 family. (114 aa)
	ARAM_002720	U3 small nucleolar ribonucleoprotein. (299 aa)
	ARAM_001387	Uncharacterized protein. (512 aa)
	ARAM_005804	RNase_PH domain-containing protein. (276 aa)
	ARAM_004086	Uncharacterized protein. (752 aa)
	ARAM_007797	Ribo_biogen_C domain-containing protein. (255 aa)
	ARAM_005697	Uncharacterized protein. (362 aa)
	ARAM_007625	Exosome component 3'-5' exonuclease. (787 aa)
	ARAM_005247	Ribosomal protein; Belongs to the universal ribosomal protein uS5 family. (260 aa)
	ARAM_005129	Putative exosome complex subunit Rrp46. (249 aa)
	ARAM_006112	60S ribosomal protein. (156 aa)
	ARAM_007174	DRIM domain-containing protein. (2605 aa)
	ARAM_001554	Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family. (513 aa)
	ARAM_007077	Protein kinase domain-containing protein. (1875 aa)
	ARAM_006255	RTC domain-containing protein. (498 aa)

Your Current Organism:

Aspergillus rambellii

NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARAM_000021	ARAM_000311	A0A0F8XC12	A0A0F8XT63	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein.	0.988
ARAM_000021	ARAM_000317	A0A0F8XC12	A0A0F8UMF8	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	Putative mitochondrial 37S ribosomal protein; Belongs to the universal ribosomal protein uS13 family.	0.990
ARAM_000021	ARAM_000359	A0A0F8XC12	A0A0F8VU67	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	Mitochondrial 37S ribosomal protein.	0.995
ARAM_000021	ARAM_000393	A0A0F8XC12	A0A0F8V4T1	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	Mitochondrial 37S ribosomal protein.	0.994
ARAM_000021	ARAM_000430	A0A0F8XC12	A0A0F8UA89	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.999
ARAM_000021	ARAM_000763	A0A0F8XC12	A0A0F8UEN3	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	rRNA methyltransferase NOP1.	0.521
ARAM_000021	ARAM_000938	A0A0F8XC12	A0A0F8WNV4	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.999
ARAM_000021	ARAM_001242	A0A0F8XC12	A0A0F8VUG5	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.992
ARAM_000021	ARAM_001554	A0A0F8XC12	A0A0F8USN7	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.615
ARAM_000021	ARAM_001626	A0A0F8XC12	A0A0F8WKS6	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	Ribosomal_S10 domain-containing protein.	0.999
ARAM_000021	ARAM_001886	A0A0F8XC12	A0A0F8WL67	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.994
ARAM_000021	ARAM_001892	A0A0F8XC12	A0A0F8UFZ3	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein; Belongs to the universal ribosomal protein uS4 family.	0.999
ARAM_000021	ARAM_002049	A0A0F8XC12	A0A0F8X885	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein; Belongs to the universal ribosomal protein uS13 family.	0.994
ARAM_000021	ARAM_002218	A0A0F8XC12	A0A0F8VH30	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.939
ARAM_000021	ARAM_002369	A0A0F8XC12	A0A0F8V4T4	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein; Belongs to the universal ribosomal protein uS15 family.	0.999
ARAM_000021	ARAM_002657	A0A0F8XC12	A0A0F8ULT7	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.979
ARAM_000021	ARAM_002792	A0A0F8XC12	A0A0F8WDJ0	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.	0.997
ARAM_000021	ARAM_002815	A0A0F8XC12	A0A0F8XUP8	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	60S ribosomal protein.	0.999
ARAM_000021	ARAM_003015	A0A0F8XC12	A0A0F8V610	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein; Belongs to the universal ribosomal protein uS12 family.	0.999
ARAM_000021	ARAM_003098	A0A0F8XC12	A0A0F8UL99	40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.999