(26 nodes) Bacteriochlorophyll metabolic process, and Photosynthesis, light reaction network (Rhodovulum sp. MB263)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	ARC87559.1	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
	ARC87560.1	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
	ARC90426.1	Bacteriochlorophyll/chlorophyll a synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)
	ARC90427.1	Transcriptional regulator PpsR; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)
	ARC87561.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
	ARC87562.1	2-vinyl bacteriochlorophyllide hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
	bchN	Ferredoxin:protochlorophyllide reductase (ATP-dependent) subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. (429 aa)
	bchB	Ferredoxin:protochlorophyllide reductase (ATP-dependent) subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. (514 aa)
	bchL	Ferredoxin:protochlorophyllide reductase (ATP-dependent) iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. (298 aa)
	ARC87568.1	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)
	ARC87569.1	Photosynthetic reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
	ARC87570.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
	ARC87571.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)
	ARC87572.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (98 aa)
	acsF	Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family. (371 aa)
	ARC87574.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
	ARC90264.1	Hypothetical protein; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. (356 aa)
	ARC90265.1	Photosynthetic reaction center subunit M; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. (322 aa)
	ARC90266.1	Photosynthetic reaction center subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the reaction center PufL/M/PsbA/D family. (284 aa)
	ARC90267.1	Light-harvesting protein; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (54 aa)
	ARC90268.1	Light-harvesting protein; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (48 aa)
	ARC90269.1	Protein pufQ; Required for bacteriochlorophyll biosynthesis. Directly involved in the assembly of both the B875 and B800-850 pigment-protein complexes. (73 aa)
	ARC90270.1	Chlorophyllide a reductase subunit Z; Derived by automated computational analysis using gene prediction method: Protein Homology. (494 aa)
	ARC90271.1	Chlorophyllide a reductase subunit Y; Derived by automated computational analysis using gene prediction method: Protein Homology. (526 aa)
	ARC90272.1	Chlorophyllide a reductase iron protein subunit X; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NifH/BchL/ChlL family. (334 aa)
	ARC90273.1	Chlorophyll synthesis pathway protein BchC; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)

Your Current Organism:

Rhodovulum sp. MB263

NCBI taxonomy Id: 308754
Other names: R. sp. MB263

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARC87559.1	ARC87560.1	B5V46_02425	B5V46_02430	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
ARC87559.1	ARC87561.1	B5V46_02425	B5V46_02445	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
ARC87559.1	ARC87562.1	B5V46_02425	B5V46_02450	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-vinyl bacteriochlorophyllide hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
ARC87559.1	ARC87568.1	B5V46_02425	B5V46_02480	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.870
ARC87559.1	ARC87569.1	B5V46_02425	B5V46_02485	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Photosynthetic reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.872
ARC87559.1	ARC87570.1	B5V46_02425	B5V46_02490	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.867
ARC87559.1	ARC87571.1	B5V46_02425	B5V46_02495	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.854
ARC87559.1	ARC87572.1	B5V46_02425	B5V46_02500	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.796
ARC87559.1	ARC87574.1	B5V46_02425	B5V46_02510	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.882
ARC87559.1	ARC90264.1	B5V46_02425	B5V46_17445	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor.	0.575
ARC87559.1	ARC90265.1	B5V46_02425	B5V46_17450	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Photosynthetic reaction center subunit M; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.	0.804
ARC87559.1	ARC90266.1	B5V46_02425	B5V46_17455	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Photosynthetic reaction center subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the reaction center PufL/M/PsbA/D family.	0.803
ARC87559.1	ARC90267.1	B5V46_02425	B5V46_17460	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Light-harvesting protein; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	0.767
ARC87559.1	ARC90268.1	B5V46_02425	B5V46_17465	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Light-harvesting protein; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	0.696
ARC87559.1	ARC90270.1	B5V46_02425	B5V46_17475	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chlorophyllide a reductase subunit Z; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.877
ARC87559.1	ARC90271.1	B5V46_02425	B5V46_17480	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chlorophyllide a reductase subunit Y; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.880
ARC87559.1	ARC90272.1	B5V46_02425	B5V46_17485	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chlorophyllide a reductase iron protein subunit X; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NifH/BchL/ChlL family.	0.841
ARC87559.1	ARC90273.1	B5V46_02425	B5V46_17490	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chlorophyll synthesis pathway protein BchC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.847
ARC87559.1	ARC90426.1	B5V46_02425	B5V46_02435	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bacteriochlorophyll/chlorophyll a synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ARC87559.1	ARC90427.1	B5V46_02425	B5V46_02440	Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator PpsR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914