Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| HVO_0608 | ilvA1 | HVO_0608 | HVO_0464 | Oxidoreductase (homolog to zinc-containing alcohol dehydrogenase). | Threonine ammonia-lyase. | 0.915 |
| HVO_0608 | ltaE | HVO_0608 | HVO_0243 | Oxidoreductase (homolog to zinc-containing alcohol dehydrogenase). | Threonine aldolase. | 0.956 |
| HVO_0608 | thrC1 | HVO_0608 | HVO_0470 | Oxidoreductase (homolog to zinc-containing alcohol dehydrogenase). | Threonine synthase. | 0.901 |
| HVO_0608 | thrC2 | HVO_0608 | HVO_0818 | Oxidoreductase (homolog to zinc-containing alcohol dehydrogenase). | Threonine synthase. | 0.901 |
| HVO_0608 | thrC3 | HVO_0608 | HVO_2969 | Oxidoreductase (homolog to zinc-containing alcohol dehydrogenase). | Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | 0.901 |
| HVO_1505 | ilvB1 | HVO_1505 | HVO_1508 | Uncharacterized protein. | Acetolactate synthase large subunit. | 0.790 |
| HVO_1505 | ilvC | HVO_1505 | HVO_1506 | Uncharacterized protein. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.792 |
| HVO_1505 | ilvN | HVO_1505 | HVO_1507 | Uncharacterized protein. | Acetolactate synthase small subunit. | 0.792 |
| HVO_1505 | leuB | HVO_1505 | HVO_1502 | Uncharacterized protein. | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. | 0.800 |
| HVO_1505 | leuC1 | HVO_1505 | HVO_1504 | Uncharacterized protein. | 3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.800 |
| HVO_1505 | leuD1 | HVO_1505 | HVO_1503 | Uncharacterized protein. | 3-isopropylmalate dehydratase small subunit. | 0.800 |
| HVO_2114 | asd | HVO_2114 | HVO_2487 | Homolog to 4-hydroxy-tetrahydrodipicolinate synthase. | Aspartate-semialdehyde dehydrogenase. | 0.646 |
| HVO_2114 | dapB | HVO_2114 | HVO_1100 | Homolog to 4-hydroxy-tetrahydrodipicolinate synthase. | 4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.868 |
| HVO_2114 | dapD | HVO_2114 | HVO_1099 | Homolog to 4-hydroxy-tetrahydrodipicolinate synthase. | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase. | 0.577 |
| HVO_2114 | dapF | HVO_2114 | HVO_1097 | Homolog to 4-hydroxy-tetrahydrodipicolinate synthase. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine. | 0.629 |
| HVO_2114 | lysA | HVO_2114 | HVO_1098 | Homolog to 4-hydroxy-tetrahydrodipicolinate synthase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.740 |
| HVO_2114 | lysC | HVO_2114 | HVO_0008 | Homolog to 4-hydroxy-tetrahydrodipicolinate synthase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.704 |
| asd | HVO_2114 | HVO_2487 | HVO_2114 | Aspartate-semialdehyde dehydrogenase. | Homolog to 4-hydroxy-tetrahydrodipicolinate synthase. | 0.646 |
| asd | dapA | HVO_2487 | HVO_1101 | Aspartate-semialdehyde dehydrogenase. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.964 |
| asd | dapB | HVO_2487 | HVO_1100 | Aspartate-semialdehyde dehydrogenase. | 4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.859 |
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