(5 nodes) Geraniol degradation, and Acyl-CoA dehydrogenase, C-terminal domain network (Salinibacter ruber)

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	SRU_1210	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737. (802 aa)
	atoB	acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
	FadE	Oxidoreductase, acyl-CoA dehydrogenase family; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771. (856 aa)
	yfcX	Fatty oxidation complex, alpha subunit; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; Belongs to the enoyl-CoA hydratase/isomerase family. (719 aa)
	hadHB	Fatty oxidation complex, beta subunit; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family. (460 aa)

Your Current Organism:

Salinibacter ruber

NCBI taxonomy Id: 309807
Other names: S. ruber DSM 13855, Salinibacter ruber DSM 13855, Salinibacter ruber str. DSM 13855, Salinibacter ruber strain DSM 13855

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FadE	SRU_1210	SRU_1213	SRU_1210	Oxidoreductase, acyl-CoA dehydrogenase family; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771.	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737.	0.944
FadE	atoB	SRU_1213	SRU_1211	Oxidoreductase, acyl-CoA dehydrogenase family; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771.	acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.	0.966
FadE	hadHB	SRU_1213	SRU_1460	Oxidoreductase, acyl-CoA dehydrogenase family; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771.	Fatty oxidation complex, beta subunit; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.	0.969
FadE	yfcX	SRU_1213	SRU_1459	Oxidoreductase, acyl-CoA dehydrogenase family; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771.	Fatty oxidation complex, alpha subunit; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; Belongs to the enoyl-CoA hydratase/isomerase family.	0.995
SRU_1210	FadE	SRU_1210	SRU_1213	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737.	Oxidoreductase, acyl-CoA dehydrogenase family; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771.	0.944
SRU_1210	atoB	SRU_1210	SRU_1211	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737.	acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.	0.999
SRU_1210	hadHB	SRU_1210	SRU_1460	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737.	Fatty oxidation complex, beta subunit; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.	0.999
SRU_1210	yfcX	SRU_1210	SRU_1459	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737.	Fatty oxidation complex, alpha subunit; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; Belongs to the enoyl-CoA hydratase/isomerase family.	0.973
atoB	FadE	SRU_1211	SRU_1213	acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.	Oxidoreductase, acyl-CoA dehydrogenase family; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771.	0.966
atoB	SRU_1210	SRU_1211	SRU_1210	acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737.	0.999
atoB	hadHB	SRU_1211	SRU_1460	acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.	Fatty oxidation complex, beta subunit; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.	0.918
atoB	yfcX	SRU_1211	SRU_1459	acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.	Fatty oxidation complex, alpha subunit; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; Belongs to the enoyl-CoA hydratase/isomerase family.	0.999
hadHB	FadE	SRU_1460	SRU_1213	Fatty oxidation complex, beta subunit; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.	Oxidoreductase, acyl-CoA dehydrogenase family; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771.	0.969
hadHB	SRU_1210	SRU_1460	SRU_1210	Fatty oxidation complex, beta subunit; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737.	0.999
hadHB	atoB	SRU_1460	SRU_1211	Fatty oxidation complex, beta subunit; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.	acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.	0.918
hadHB	yfcX	SRU_1460	SRU_1459	Fatty oxidation complex, beta subunit; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.	Fatty oxidation complex, alpha subunit; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; Belongs to the enoyl-CoA hydratase/isomerase family.	0.999
yfcX	FadE	SRU_1459	SRU_1213	Fatty oxidation complex, alpha subunit; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; Belongs to the enoyl-CoA hydratase/isomerase family.	Oxidoreductase, acyl-CoA dehydrogenase family; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771.	0.995
yfcX	SRU_1210	SRU_1459	SRU_1210	Fatty oxidation complex, alpha subunit; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; Belongs to the enoyl-CoA hydratase/isomerase family.	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737.	0.973
yfcX	atoB	SRU_1459	SRU_1211	Fatty oxidation complex, alpha subunit; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; Belongs to the enoyl-CoA hydratase/isomerase family.	acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.	0.999
yfcX	hadHB	SRU_1459	SRU_1460	Fatty oxidation complex, alpha subunit; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; Belongs to the enoyl-CoA hydratase/isomerase family.	Fatty oxidation complex, beta subunit; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.	0.999