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SRU_0301 SRU_0301 metX metX lysC lysC SRU_0482 SRU_0482 SRU_0666 SRU_0666 thrB thrB ThrA ThrA dapD dapD dapA dapA dapB dapB SRU_1296 SRU_1296 dapF dapF SRU_1435 SRU_1435 ansA ansA argB argB lysC-2 lysC-2 purA purA asd asd argG argG argC argC SRU_2217 SRU_2217 SRU_2218 SRU_2218 argB-2 argB-2 SRU_2220 SRU_2220 argH argH thrC thrC asg asg
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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SRU_0301Diaminopimelate decarboxylase; Identified by match to protein family HMM PF00278; match to protein family HMM PF00696; match to protein family HMM PF01842; match to protein family HMM PF02784; match to protein family HMM TIGR00657; match to protein family HMM TIGR01048; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (870 aa)
metXHomoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. (352 aa)
lysCAspartate kinase; Identified by match to protein family HMM PF00696; Belongs to the aspartokinase family. (317 aa)
SRU_0482Bifunctional aspartokinase/homoserine dehydrogenase I; Identified by match to protein family HMM PF00742; match to protein family HMM PF03447. (374 aa)
SRU_0666Amidinotransferase superfamily; Identified by match to protein family HMM PF02274. (435 aa)
thrBHomoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. (298 aa)
ThrABifunctional aspartokinase/homoserine dehydrogenase I; Identified by match to protein family HMM PF00696; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447; match to protein family HMM TIGR00657. (821 aa)
dapD2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. (280 aa)
dapADihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (302 aa)
dapBDihydrodipicolinate reductase; Identified by match to protein family HMM PF01113; match to protein family HMM PF05173; match to protein family HMM TIGR00036; Belongs to the DapB family. (236 aa)
SRU_1296Asparaginase superfamily; Identified by match to protein family HMM PF01112. (345 aa)
dapFDiaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (285 aa)
SRU_1435Putative dihydrodipicolinate synthase; Identified by match to protein family HMM PF00701. (312 aa)
ansAL-asparaginase; Identified by match to protein family HMM PF00710; match to protein family HMM TIGR00519. (362 aa)
argBAcetylglutamate kinase. (247 aa)
lysC-2Aspartate kinase; Identified by match to protein family HMM PF00696; Belongs to the aspartokinase family. (310 aa)
purAAdenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (439 aa)
asdAspartate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR00978; Belongs to the aspartate-semialdehyde dehydrogenase family. (363 aa)
argGArgininosuccinate synthase; Identified by match to protein family HMM PF00764; match to protein family HMM TIGR00032; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (413 aa)
argCN-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (353 aa)
SRU_2217Aminotransferase, class III superfamily; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (395 aa)
SRU_2218Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain family; Identified by match to protein family HMM PF00185; match to protein family HMM PF02729; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (352 aa)
argB-2Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (267 aa)
SRU_2220Peptidase, M20A family; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687. (361 aa)
argHArgininosuccinate lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838. (437 aa)
thrCThreonine synthase; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR00260. (438 aa)
asgAsparaginase; Identified by match to protein family HMM PF01112. (403 aa)
Your Current Organism:
Salinibacter ruber
NCBI taxonomy Id: 309807
Other names: S. ruber DSM 13855, Salinibacter ruber DSM 13855, Salinibacter ruber str. DSM 13855, Salinibacter ruber strain DSM 13855
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