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| | coaBC | Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (413 aa) |
| | plsX | Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. (338 aa) |
| | fabH | 3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (334 aa) |
| | fabD | Malonyl CoA-acyl carrier protein transacylase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128. (340 aa) |
| | SRU_0057 | Acyl-ACP thioesterase superfamily; Identified by match to protein family HMM PF01643. (248 aa) |
| | murQ | Conserved hypothetical protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. (311 aa) |
| | SRU_0069 | Putative phosphate acetyltransferase/enoyl-CoA hydratase fusion protein; Identified by match to protein family HMM PF01575. (148 aa) |
| | gnd | 6-phosphogluconate dehydrogenase (decarboxylating); Identified by match to protein family HMM PF00393; match to protein family HMM PF03446; match to protein family HMM TIGR00872. (329 aa) |
| | ppc | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (957 aa) |
| | SRU_0133 | Identified by match to protein family HMM PF03061. (148 aa) |
| | SRU_0150 | Vitamin B12-dependent methionine synthase family protein; Identified by match to protein family HMM PF02574. (320 aa) |
| | SRU_0293 | Conserved hypothetical protein. (55 aa) |
| | SRU_0301 | Diaminopimelate decarboxylase; Identified by match to protein family HMM PF00278; match to protein family HMM PF00696; match to protein family HMM PF01842; match to protein family HMM PF02784; match to protein family HMM TIGR00657; match to protein family HMM TIGR01048; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (870 aa) |
| | nosD | NosD protein; Identified by match to protein family HMM PF05048. (465 aa) |
| | glnA | Glutamine synthetase, type I; Identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653. (465 aa) |
| | folA | Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. (186 aa) |
| | SRU_0427 | Amine oxidase, flavin-containing; Identified by match to protein family HMM PF01593. (360 aa) |
| | SRU_0454 | Carboxypeptidase G2; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687. (413 aa) |
| | SRU_0455 | Hypothetical protein; Identified by Glimmer2; putative. (348 aa) |
| | ileS | isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. (1080 aa) |
| | accC | acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (506 aa) |
| | cysD | O-acetylhomoserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326. (470 aa) |
| | metX | Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. (352 aa) |
| | lysC | Aspartate kinase; Identified by match to protein family HMM PF00696; Belongs to the aspartokinase family. (317 aa) |
| | SRU_0482 | Bifunctional aspartokinase/homoserine dehydrogenase I; Identified by match to protein family HMM PF00742; match to protein family HMM PF03447. (374 aa) |
| | SRU_0491 | Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00753. (291 aa) |
| | aroQ | 3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. (142 aa) |
| | gdhA | Glutamate dehydrogenase; Identified by similarity to SP:P96110; match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (434 aa) |
| | SRU_0512 | Conserved hypothetical protein. (136 aa) |
| | purQ | Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...] (235 aa) |
| | fabI | Enoyl-(acyl-carrier-protein) reductase. (278 aa) |
| | SRU_0542 | Aminotransferase, class IV superfamily; Identified by match to protein family HMM PF01063. (279 aa) |
| | SRU_0546 | Proline dehydrogenase superfamily; Identified by match to protein family HMM PF01619. (286 aa) |
| | pyrG | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (565 aa) |
| | alr | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (450 aa) |
| | SRU_0576 | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit; Identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM PF02780. (700 aa) |
| | SRU_0596 | UDP-glucose dehydrogenase; Identified by match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF02558; match to protein family HMM PF03721. (439 aa) |
| | SRU_0647 | Putative chorismate mutase; Identified by match to protein family HMM PF01817. (159 aa) |
| | aroK | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (204 aa) |
| | SRU_0666 | Amidinotransferase superfamily; Identified by match to protein family HMM PF02274. (435 aa) |
| | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. (430 aa) |
| | ldh | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. (316 aa) |
| | ispG | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. (457 aa) |
| | ispE | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (323 aa) |
| | thrB | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. (298 aa) |
| | ThrA | Bifunctional aspartokinase/homoserine dehydrogenase I; Identified by match to protein family HMM PF00696; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447; match to protein family HMM TIGR00657. (821 aa) |
| | SRU_0709 | IMP dehydrogenase / GMP reductase domain, putative; Identified by match to protein family HMM PF00107. (383 aa) |
| | SRU_0717 | Phenylalanine and histidine ammonia-lyase; Identified by match to protein family HMM PF00221. (517 aa) |
| | hutH | Histidine ammonia-lyase; Identified by match to protein family HMM PF00221; match to protein family HMM TIGR01225. (497 aa) |
| | hisG | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily. (283 aa) |
| | hisE | phosphoribosyl-ATP pyrophosphohydrolase; Identified by match to protein family HMM PF01503. (87 aa) |
| | bioB | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (359 aa) |
| | folB | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. (142 aa) |
| | SRU_0762 | Possible Glutamine amidotransferase; Identified by match to protein family HMM PF00117. (284 aa) |
| | SRU_0767 | N-acyl-L-amino acid amidohydrolase, putative; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891. (396 aa) |
| | glyA | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (432 aa) |
| | eno | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (429 aa) |
| | lipA | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (392 aa) |
| | SRU_0798 | Identified by match to protein family HMM PF07969. (571 aa) |
| | SRU_0799 | Aminotransferase, class III superfamily; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (462 aa) |
| | SRU_0811 | 2-oxo acid dehydrogenases acyltransferase (catalytic domain) protein; Identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817. (639 aa) |
| | SRU_0817 | Translation initiation factor eIF-2B alpha subunit; Identified by match to protein family HMM PF00293; match to protein family HMM PF01008; Belongs to the eIF-2B alpha/beta/delta subunits family. (446 aa) |
| | pfkA | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (360 aa) |
| | pycA | Pyruvate carboxylase; Identified by match to protein family HMM PF00364. (186 aa) |
| | SRU_0837 | Tyrosine decarboxylase, putative; Identified by match to protein family HMM PF00282. (842 aa) |
| | hisS | histidyl-tRNA synthetase; Identified by match to protein family HMM PF00152; match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442. (435 aa) |
| | purF | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (566 aa) |
| | ald | Alanine dehydrogenase; Identified by match to protein family HMM PF01262; match to protein family HMM PF05222. (407 aa) |
| | lysS | lysyl-tRNA synthetase; Identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499; Belongs to the class-II aminoacyl-tRNA synthetase family. (514 aa) |
| | SRU_0922 | Truncated methionine synthase-like protein; Identified by match to protein family HMM PF01717. (356 aa) |
| | SRU_0931 | Putative thiosulfate sulfurtransferase, putative; Identified by match to protein family HMM PF00581. (538 aa) |
| | leuS | leucyl-tRNA synthetase; Identified by match to protein family HMM PF00133; match to protein family HMM TIGR00396; Belongs to the class-I aminoacyl-tRNA synthetase family. (863 aa) |
| | accB | acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (209 aa) |
| | accC-2 | acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (491 aa) |
| | folK | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498. (184 aa) |
| | carA | Carbamoyl-phosphate synthase, small subunit; Identified by match to protein family HMM PF00117; match to protein family HMM PF00988; match to protein family HMM TIGR01368; Belongs to the CarA family. (386 aa) |
| | dapD | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. (280 aa) |
| | SRU_0972 | Glutamine amidotransferase, class I; Identified by match to protein family HMM PF00117; match to protein family HMM PF07722. (232 aa) |
| | guaA | GMP synthase; Identified by match to protein family HMM PF00117; match to protein family HMM PF07685. (245 aa) |
| | argS | arginyl-tRNA synthetase; Identified by match to protein family HMM PF00750; match to protein family HMM PF03485; match to protein family HMM PF05746; match to protein family HMM TIGR00456. (562 aa) |
| | SRU_0989 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. (328 aa) |
| | cysS | cysteinyl-tRNA synthetase; Identified by match to protein family HMM PF01406; match to protein family HMM TIGR00435; Belongs to the class-I aminoacyl-tRNA synthetase family. (569 aa) |
| | hisI | phosphoribosyl-AMP cyclohydrolase domain protein; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. (127 aa) |
| | pykA | Pyruvate kinase; Identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; Belongs to the pyruvate kinase family. (476 aa) |
| | dapA | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (302 aa) |
| | dapB | Dihydrodipicolinate reductase; Identified by match to protein family HMM PF01113; match to protein family HMM PF05173; match to protein family HMM TIGR00036; Belongs to the DapB family. (236 aa) |
| | SRU_1087 | Cupin domain protein; Identified by match to protein family HMM PF07883. (291 aa) |
| | SRU_1128 | Amidohydrolase family, putative; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969. (430 aa) |
| | SRU_1129 | Identified by match to protein family HMM PF01979. (429 aa) |
| | SRU_1133 | Lysine 2,3-aminomutase YodO family protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR00238. (401 aa) |
| | ppsA | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (824 aa) |
| | SRU_1141 | alanyl-tRNA synthetase; Identified by match to protein family HMM PF07973. (260 aa) |
| | SRU_1149 | Aminotransferase, class V superfamily; Identified by match to protein family HMM PF00266. (504 aa) |
| | accD | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA. (282 aa) |
| | SRU_1161 | Cystathionine beta-lyase MetC; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212. (408 aa) |
| | SRU_1168 | Identified by match to protein family HMM PF07969. (534 aa) |
| | gltB | Glutamate synthase, large subunit; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898. (1514 aa) |
| | gltD | Glutamate synthases, NADH/NADPH, small subunit subfamily; Identified by match to protein family HMM PF07992; match to protein family HMM TIGR01317. (526 aa) |
| | dtd | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (150 aa) |
| | SRU_1188 | Aminotransferase, class V superfamily; Identified by match to protein family HMM PF00266. (458 aa) |
| | pgk | Phosphoglycerate kinase; Identified by match to protein family HMM PF00162; Belongs to the phosphoglycerate kinase family. (398 aa) |
| | SRU_1205 | Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00753. (303 aa) |
| | fadD | Putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase; Identified by match to protein family HMM PF00501. (632 aa) |
| | atoB | acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa) |
| | SRU_1218 | propionyl-CoA carboxylase, beta subunit, putative; Identified by match to protein family HMM PF01039. (698 aa) |
| | SRU_1228 | Aldehyde dehydrogenase, mitochondrial precursor; Identified by match to protein family HMM PF00171. (529 aa) |
| | SRU_1229 | Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171. (296 aa) |
| | SRU_1231 | Pyridoxal-dependent decarboxylase family protein, putative; Identified by match to protein family HMM PF00282; match to protein family HMM PF01212. (470 aa) |
| | SRU_1239 | Putative DNA polymerase III gamma subunit. (182 aa) |
| | SRU_1246 | 3-hydroxy-3-methylglutaryl-CoA lyase; Identified by match to protein family HMM PF00682. (307 aa) |
| | proB | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. (376 aa) |
| | proA | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. (436 aa) |
| | gcvP | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (980 aa) |
| | SRU_1258 | L-2,4-diaminobutyrate decarboxylase; Identified by match to protein family HMM PF00282; match to protein family HMM PF01212. (518 aa) |
| | SRU_1267 | Aldehyde reductase; Identified by match to protein family HMM PF00248. (321 aa) |
| | SRU_1268 | Probable class-V aminotransferase; Identified by match to protein family HMM PF00266. (442 aa) |
| | metE | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. (769 aa) |
| | ilvA | Threonine dehydratase; Identified by match to protein family HMM PF00291. (331 aa) |
| | SRU_1304 | Oxidoreductase, zinc-binding dehydrogenase family; Identified by match to protein family HMM PF00107. (327 aa) |
| | pyrB | Aspartate carbamoyltransferase; Identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (322 aa) |
| | SRU_1341 | Identified by match to protein family HMM PF00753. (274 aa) |
| | SRU_1344 | Aldehyde dehydrogenase-like protein yneI; Identified by match to protein family HMM PF00171. (495 aa) |
| | SRU_1352 | Cyclase, putative; Identified by match to protein family HMM PF00753; match to protein family HMM TIGR01409. (338 aa) |
| | glmS | Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (647 aa) |
| | SRU_1368 | Cystathionine beta-lyase MetC; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212. (382 aa) |
| | hppD | 4-hydroxyphenylpyruvate dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR01263. (384 aa) |
| | SRU_1372 | Zinc-binding alcohol dehydrogenase; Identified by match to protein family HMM PF00107. (337 aa) |
| | SRU_1399 | N-acyl-L-amino acid amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891. (412 aa) |
| | SRU_1400 | Hypothetical protein; Identified by Glimmer2; putative. (719 aa) |
| | panC | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. (295 aa) |
| | panD | Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. (146 aa) |
| | SRU_1413 | 3-hydroxybutyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00725; match to protein family HMM PF02737. (284 aa) |
| | dapF | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (285 aa) |
| | SRU_1417 | Conserved hypothetical protein. (413 aa) |
| | SRU_1421 | Possible 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Identified by match to protein family HMM PF01557. (220 aa) |
| | ybjU | L-allo-threonine aldolase; Identified by match to protein family HMM PF00155; match to protein family HMM PF01212. (348 aa) |
| | SRU_1435 | Putative dihydrodipicolinate synthase; Identified by match to protein family HMM PF00701. (312 aa) |
| | SRU_1456 | Probable aldehyde dehydrogenase aldX; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. (484 aa) |
| | yfcX | Fatty oxidation complex, alpha subunit; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; Belongs to the enoyl-CoA hydratase/isomerase family. (719 aa) |
| | hadHB | Fatty oxidation complex, beta subunit; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family. (460 aa) |
| | SRU_1476 | Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. (284 aa) |
| | kynB | Putative cyclase superfamily; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. (212 aa) |
| | SRU_1509 | Oxidoreductase, zinc-binding dehydrogenase family; Identified by match to protein family HMM PF00107. (342 aa) |
| | pruA | 1-pyrroline-5-carboxylate dehydrogenase; Identified by match to protein family HMM PF00171; match to protein family HMM TIGR01236. (562 aa) |
| | aroB | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. (367 aa) |
| | alaS | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (966 aa) |
| | SRU_1547 | acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa) |
| | mtnN | MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. (276 aa) |
| | metG | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. (713 aa) |
| | hisB | Imidazoleglycerol-phosphate dehydratase; Identified by match to protein family HMM PF00475. (202 aa) |
| | proC | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (272 aa) |
| | hisH | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. (218 aa) |
| | hisA | Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Identified by match to protein family HMM PF00977; match to protein family HMM TIGR00007. (258 aa) |
| | hisF | Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. (268 aa) |
| | mdh | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (314 aa) |
| | SRU_1573 | Identified by match to protein family HMM PF00561; match to protein family HMM PF00903. (439 aa) |
| | fumC | Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (601 aa) |
| | tyrA | Prephenate dehydrogenase; Identified by match to protein family HMM PF01842; match to protein family HMM PF02153; match to protein family HMM PF03807. (381 aa) |
| | gcvT | Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine. (374 aa) |
| | tyrS | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily. (412 aa) |
| | ispF | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP). (157 aa) |
| | ispD | Uncharacterized protein family UPF0007; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). (238 aa) |
| | trpS | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. (344 aa) |
| | trpD | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (344 aa) |
| | trpC | Indole-3-glycerol phosphate synthase; Identified by match to protein family HMM PF00218; Belongs to the TrpC family. (270 aa) |
| | trpF | N-(5'phosphoribosyl)anthranilate isomerase; Identified by match to protein family HMM PF00697; Belongs to the TrpF family. (221 aa) |
| | trpB | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (406 aa) |
| | trpA | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (278 aa) |
| | SRU_1677 | Putative (NAD+) isocitrate dehydrogenase ^; Identified by match to protein family HMM PF00180. (340 aa) |
| | acs | acetyl-CoA synthase; Identified by match to protein family HMM PF00501. (663 aa) |
| | SRU_1686 | Oxidoreductase, zinc-binding dehydrogenase family protein; Identified by match to protein family HMM PF00107. (340 aa) |
| | SRU_1698 | Conserved hypothetical protein. (120 aa) |
| | tnaA | Beta-eliminating lyase; Identified by match to protein family HMM PF01212; Belongs to the beta-eliminating lyase family. (471 aa) |
| | ansA | L-asparaginase; Identified by match to protein family HMM PF00710; match to protein family HMM TIGR00519. (362 aa) |
| | argB | Acetylglutamate kinase. (247 aa) |
| | SRU_1744 | Conserved oxidoreductase; Identified by match to protein family HMM PF01113; match to protein family HMM PF02629. (342 aa) |
| | lysC-2 | Aspartate kinase; Identified by match to protein family HMM PF00696; Belongs to the aspartokinase family. (310 aa) |
| | SRU_1749 | Peptidase, M20/M25/M40 family; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687. (505 aa) |
| | SRU_1782 | Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. (529 aa) |
| | SRU_1786 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF01842; match to protein family HMM PF03949. (493 aa) |
| | SRU_1791 | Methylmalonyl-CoA mutase superfamily; Identified by match to protein family HMM PF01642. (648 aa) |
| | glnS | glutaminyl-tRNA synthetase; Identified by match to protein family HMM PF00749; match to protein family HMM PF02637; match to protein family HMM PF03950; match to protein family HMM TIGR00440. (788 aa) |
| | gltX | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. (506 aa) |
| | acs-2 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. (624 aa) |
| | asnS | asparaginyl-tRNA synthetase; Identified by match to protein family HMM PF00152; match to protein family HMM PF00587; match to protein family HMM PF01336; match to protein family HMM TIGR00457. (544 aa) |
| | asd | Aspartate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR00978; Belongs to the aspartate-semialdehyde dehydrogenase family. (363 aa) |
| | folD | FolD bifunctional protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (297 aa) |
| | panB | 3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. (265 aa) |
| | dxr | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. (457 aa) |
| | SRU_1852 | Thioesterase domain protein; Identified by match to protein family HMM PF03061. (184 aa) |
| | serS | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (428 aa) |
| | ispH | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. (413 aa) |
| | SRU_1882 | Peptidase, M20/M25/M40 family; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687. (456 aa) |
| | tpiA | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (260 aa) |
| | SRU_1906 | Deoxyribose-phosphate aldolase family; Identified by match to protein family HMM PF01791. (437 aa) |
| | SRU_1910 | Putative amidohydrolase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969. (475 aa) |
| | SRU_1911 | Putative amidohydrolase; Identified by match to protein family HMM PF01979. (447 aa) |
| | nadA | Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. (364 aa) |
| | SRU_1937 | Metallo-beta-lactamase superfamily, putative; Identified by match to protein family HMM PF00753; Belongs to the UPF0173 family. (226 aa) |
| | SRU_1942 | FAD linked oxidases, C-terminal domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF01565; match to protein family HMM PF02754; match to protein family HMM PF02913. (894 aa) |
| | pheA | Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01842. (286 aa) |
| | aspS | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. (629 aa) |
| | SRU_1966 | Pyruvate dehydrogenase beta subunit; Identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM PF02780. (633 aa) |
| | SRU_1969 | Dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (465 aa) |
| | SRU_1970 | Pyruvate dehydrogenase E1 component, beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (327 aa) |
| | pdhA | Pyruvate dehydrogenase E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (470 aa) |
| | icd | Isocitrate dehydrogenase, NADP-dependent; Identified by match to protein family HMM PF00180; match to protein family HMM TIGR00183. (411 aa) |
| | SRU_1986 | Metalloenzyme superfamily protein; Identified by match to protein family HMM PF01676. (307 aa) |
| | SRU_2039 | Cysteine synthase B; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136. (317 aa) |
| | valS | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. (901 aa) |
| | aroC | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (404 aa) |
| | PhhA | Tryptophan 5-hydroxylase 1; Identified by match to protein family HMM PF00351. (278 aa) |
| | guaA-2 | Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP. (526 aa) |
| | gcvH | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (124 aa) |
| | SRU_2086 | Identified by match to protein family HMM PF00753. (216 aa) |
| | metF | 5,10-methylenetetrahydrofolate reductase; Identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676; Belongs to the methylenetetrahydrofolate reductase family. (319 aa) |
| | pfkA-2 | Phosphofructokinase subfamily; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. (379 aa) |
| | hisD | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. (488 aa) |
| | hisC | Histidinol-phosphate aminotransferase; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (354 aa) |
| | ilvB | Acetolactate synthase, large subunit, biosynthetic type; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR00118. (596 aa) |
| | SRU_2146 | Acetolactate synthase small subunit; Identified by match to protein family HMM PF01842; match to protein family HMM TIGR00119. (240 aa) |
| | ilvC | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. (348 aa) |
| | leuB | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 1 subfamily. (412 aa) |
| | leuA | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. (546 aa) |
| | leuC | 3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (472 aa) |
| | leuD | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (205 aa) |
| | ilvD | Dihydroxy-acid dehydratase; Identified by match to protein family HMM PF00920; match to protein family HMM TIGR00110; Belongs to the IlvD/Edd family. (612 aa) |
| | SRU_2154 | 2-isopropylmalate synthase/homocitrate synthase family protein; Identified by match to protein family HMM PF00682; match to protein family HMM TIGR00977; Belongs to the alpha-IPM synthase/homocitrate synthase family. (552 aa) |
| | serC | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (369 aa) |
| | argG | Argininosuccinate synthase; Identified by match to protein family HMM PF00764; match to protein family HMM TIGR00032; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (413 aa) |
| | SRU_2215 | Hypothetical protein; Identified by Glimmer2; putative. (377 aa) |
| | argC | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (353 aa) |
| | SRU_2217 | Aminotransferase, class III superfamily; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (395 aa) |
| | SRU_2218 | Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain family; Identified by match to protein family HMM PF00185; match to protein family HMM PF02729; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (352 aa) |
| | argB-2 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (267 aa) |
| | SRU_2220 | Peptidase, M20A family; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687. (361 aa) |
| | argH | Argininosuccinate lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838. (437 aa) |
| | pccB | Putative propionyl-CoA carboxylase beta chain protein; Identified by match to protein family HMM PF01039. (561 aa) |
| | SRU_2255 | Glutamate dehydrogenase, short peptide; Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (553 aa) |
| | aroE | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). (285 aa) |
| | ilvA-2 | Threonine dehydratase; Identified by match to protein family HMM PF00291; match to protein family HMM PF01842; match to protein family HMM TIGR01127. (470 aa) |
| | ilvE | Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (313 aa) |
| | glyS | glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. (512 aa) |
| | accA | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (335 aa) |
| | gpmI | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (523 aa) |
| | fahA | Fumarylacetoacetase; Identified by match to protein family HMM PF01557; match to protein family HMM TIGR01266. (429 aa) |
| | SRU_2361 | Hypothetical protein; Identified by Glimmer2; putative. (353 aa) |
| | SRU_2363 | Cys/Met metabolism PLP-dependent enzyme superfamily; Identified by match to protein family HMM PF01053. (412 aa) |
| | thrC | Threonine synthase; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR00260. (438 aa) |
| | SRU_2380 | AMP-binding enzyme, putative; Identified by match to protein family HMM PF00501. (632 aa) |
| | anmK | Uncharacterized protein family (UPF0075); Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. (397 aa) |
| | SRU_2433 | Metal-activated pyridoxal enzyme; Identified by match to protein family HMM PF01168. (388 aa) |
| | SRU_2489 | 3-deoxy-7-phosphoheptulonate synthase; Identified by similarity to GB:AAU28096.1; match to protein family HMM PF01474; match to protein family HMM TIGR01358; Belongs to the class-II DAHP synthase family. (452 aa) |
| | proS | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). (527 aa) |
| | SRU_2709 | Probable nucleotide sugar dehydrogenase; Identified by match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF03720; match to protein family HMM PF03721. (462 aa) |
| | fabF | 3-oxoacyl-(acyl-carrier-protein) synthase II; Identified by match to protein family HMM PF00109; match to protein family HMM PF02801; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (474 aa) |
| | fabF-2 | 3-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (419 aa) |
| | acpP | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (78 aa) |
| | SRU_2770 | Conserved hypothetical protein. (291 aa) |
| | SRU_2787 | Cysteine synthase B; Identified by match to protein family HMM PF00291. (466 aa) |
| | SRU_2799 | Acetylornithine deacetylase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687. (372 aa) |
| | thrS | threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). (694 aa) |
| | pheS | phenylalanyl-tRNA synthetase, alpha subunit; Identified by match to protein family HMM PF01409; match to protein family HMM PF02912; match to protein family HMM TIGR00468; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. (336 aa) |
| | pheT | phenylalanyl-tRNA synthetase, beta subunit; Identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. (830 aa) |
