19 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rasa1	RAS p21 protein activator (GTPase activating protein) 1a. (1056 aa)
	rapgef2	Rap guanine nucleotide exchange factor (GEF) 2. (1642 aa)
	LOC101069736	Zgc:55558. (187 aa)
	LOC101074250	RAP1A, member of RAS oncogene family a. (185 aa)
	apbb1ip	Amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein. (632 aa)
	LOC101073008	RAS guanyl releasing protein 4. (701 aa)
	LOC101064095	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b. (1330 aa)
	hras	HRas proto-oncogene, GTPase a. (189 aa)
	LOC101064935	Uncharacterized protein. (185 aa)
	kras	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog. (210 aa)
	LOC101070080	Uncharacterized protein. (184 aa)
	RASGRP2	RAS guanyl releasing protein 2. (608 aa)
	LOC101073885	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1a. (1446 aa)
	RASGRP1	RAS guanyl releasing protein 1. (786 aa)
	rapgef6	Rap guanine nucleotide exchange factor (GEF) 6. (1671 aa)
	tlnrd1-2	Talin rod domain-containing protein 1-like. (354 aa)
	rap2c	RAP2C, member of RAS oncogene family. (183 aa)
	rap1a	Uncharacterized protein. (145 aa)
	rras2	RAS related 2. (202 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101064095	LOC101064935	ENSTRUP00000050250	ENSTRUP00000052446	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b.	Uncharacterized protein.	0.638
LOC101064095	LOC101069736	ENSTRUP00000050250	ENSTRUP00000016293	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b.	Zgc:55558.	0.497
LOC101064095	LOC101070080	ENSTRUP00000050250	ENSTRUP00000055897	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b.	Uncharacterized protein.	0.638
LOC101064095	LOC101074250	ENSTRUP00000050250	ENSTRUP00000016335	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b.	RAP1A, member of RAS oncogene family a.	0.638
LOC101064095	hras	ENSTRUP00000050250	ENSTRUP00000052118	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b.	HRas proto-oncogene, GTPase a.	0.497
LOC101064095	kras	ENSTRUP00000050250	ENSTRUP00000052814	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b.	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	0.497
LOC101064095	rap1a	ENSTRUP00000050250	ENSTRUP00000073508	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b.	Uncharacterized protein.	0.638
LOC101064095	rap2c	ENSTRUP00000050250	ENSTRUP00000069428	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b.	RAP2C, member of RAS oncogene family.	0.497
LOC101064095	tlnrd1-2	ENSTRUP00000050250	ENSTRUP00000069199	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b.	Talin rod domain-containing protein 1-like.	0.648
LOC101064935	LOC101064095	ENSTRUP00000052446	ENSTRUP00000050250	Uncharacterized protein.	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b.	0.638
LOC101064935	LOC101070080	ENSTRUP00000052446	ENSTRUP00000055897	Uncharacterized protein.	Uncharacterized protein.	0.900
LOC101064935	LOC101073008	ENSTRUP00000052446	ENSTRUP00000049238	Uncharacterized protein.	RAS guanyl releasing protein 4.	0.720
LOC101064935	LOC101073885	ENSTRUP00000052446	ENSTRUP00000060752	Uncharacterized protein.	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1a.	0.638
LOC101064935	LOC101074250	ENSTRUP00000052446	ENSTRUP00000016335	Uncharacterized protein.	RAP1A, member of RAS oncogene family a.	0.900
LOC101064935	RASGRP1	ENSTRUP00000052446	ENSTRUP00000063036	Uncharacterized protein.	RAS guanyl releasing protein 1.	0.720
LOC101064935	RASGRP2	ENSTRUP00000052446	ENSTRUP00000058618	Uncharacterized protein.	RAS guanyl releasing protein 2.	0.720
LOC101064935	apbb1ip	ENSTRUP00000052446	ENSTRUP00000025466	Uncharacterized protein.	Amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein.	0.812
LOC101064935	rapgef2	ENSTRUP00000052446	ENSTRUP00000009874	Uncharacterized protein.	Rap guanine nucleotide exchange factor (GEF) 2.	0.672
LOC101064935	rapgef6	ENSTRUP00000052446	ENSTRUP00000065283	Uncharacterized protein.	Rap guanine nucleotide exchange factor (GEF) 6.	0.965
LOC101064935	rasa1	ENSTRUP00000052446	ENSTRUP00000003275	Uncharacterized protein.	RAS p21 protein activator (GTPase activating protein) 1a.	0.463