(8 nodes) Mixed, incl. Ras association domain-containing protein 1-6, and Trunk segmentation network (Takifugu rubripes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cnksr1	Connector enhancer of kinase suppressor of Ras 1. (831 aa)
	RASSF1	Ras association domain family member 1. (279 aa)
	rasl11b	RAS-like, family 11, member B. (248 aa)
	map1b	Microtubule-associated protein 1B. (2002 aa)
	SYDE2	Synapse defective Rho GTPase homolog 2. (1666 aa)
	H2UG80_TAKRU	Ras association domain family member 1. (406 aa)
	LOC101072191	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family. (822 aa)
	arrdc2	Arrestin domain containing 2. (454 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2UG80_TAKRU	cnksr1	ENSTRUP00000070554	ENSTRUP00000026130	Ras association domain family member 1.	Connector enhancer of kinase suppressor of Ras 1.	0.417
H2UG80_TAKRU	rasl11b	ENSTRUP00000070554	ENSTRUP00000038206	Ras association domain family member 1.	RAS-like, family 11, member B.	0.465
RASSF1	cnksr1	ENSTRUP00000034461	ENSTRUP00000026130	Ras association domain family member 1.	Connector enhancer of kinase suppressor of Ras 1.	0.417
RASSF1	rasl11b	ENSTRUP00000034461	ENSTRUP00000038206	Ras association domain family member 1.	RAS-like, family 11, member B.	0.465
SYDE2	arrdc2	ENSTRUP00000047224	ENSTRUP00000076040	Synapse defective Rho GTPase homolog 2.	Arrestin domain containing 2.	0.403
SYDE2	cnksr1	ENSTRUP00000047224	ENSTRUP00000026130	Synapse defective Rho GTPase homolog 2.	Connector enhancer of kinase suppressor of Ras 1.	0.499
SYDE2	rasl11b	ENSTRUP00000047224	ENSTRUP00000038206	Synapse defective Rho GTPase homolog 2.	RAS-like, family 11, member B.	0.660
arrdc2	SYDE2	ENSTRUP00000076040	ENSTRUP00000047224	Arrestin domain containing 2.	Synapse defective Rho GTPase homolog 2.	0.403
arrdc2	cnksr1	ENSTRUP00000076040	ENSTRUP00000026130	Arrestin domain containing 2.	Connector enhancer of kinase suppressor of Ras 1.	0.403
arrdc2	rasl11b	ENSTRUP00000076040	ENSTRUP00000038206	Arrestin domain containing 2.	RAS-like, family 11, member B.	0.566
cnksr1	H2UG80_TAKRU	ENSTRUP00000026130	ENSTRUP00000070554	Connector enhancer of kinase suppressor of Ras 1.	Ras association domain family member 1.	0.417
cnksr1	RASSF1	ENSTRUP00000026130	ENSTRUP00000034461	Connector enhancer of kinase suppressor of Ras 1.	Ras association domain family member 1.	0.417
cnksr1	SYDE2	ENSTRUP00000026130	ENSTRUP00000047224	Connector enhancer of kinase suppressor of Ras 1.	Synapse defective Rho GTPase homolog 2.	0.499
cnksr1	arrdc2	ENSTRUP00000026130	ENSTRUP00000076040	Connector enhancer of kinase suppressor of Ras 1.	Arrestin domain containing 2.	0.403
cnksr1	rasl11b	ENSTRUP00000026130	ENSTRUP00000038206	Connector enhancer of kinase suppressor of Ras 1.	RAS-like, family 11, member B.	0.680
rasl11b	H2UG80_TAKRU	ENSTRUP00000038206	ENSTRUP00000070554	RAS-like, family 11, member B.	Ras association domain family member 1.	0.465
rasl11b	RASSF1	ENSTRUP00000038206	ENSTRUP00000034461	RAS-like, family 11, member B.	Ras association domain family member 1.	0.465
rasl11b	SYDE2	ENSTRUP00000038206	ENSTRUP00000047224	RAS-like, family 11, member B.	Synapse defective Rho GTPase homolog 2.	0.660
rasl11b	arrdc2	ENSTRUP00000038206	ENSTRUP00000076040	RAS-like, family 11, member B.	Arrestin domain containing 2.	0.566
rasl11b	cnksr1	ENSTRUP00000038206	ENSTRUP00000026130	RAS-like, family 11, member B.	Connector enhancer of kinase suppressor of Ras 1.	0.680