(15 nodes) LUBAC complex, and Protein linear deubiquitination network (Takifugu rubripes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSTRUP00000000520	Ubiquitin carboxyl-terminal hydrolase CYLD-like. (668 aa)
	LOC115247907	Si:dkey-181m9.8. (704 aa)
	LOC101068646	E3 ubiquitin-protein ligase RNF31-like. (1147 aa)
	rbck1	RanBP-type and C3HC4-type zinc finger containing 1. (517 aa)
	rnf31	Uncharacterized protein. (1091 aa)
	spata2l	Spermatogenesis associated 2-like. (517 aa)
	LOC101078865	Cylindromatosis (turban tumor syndrome), b. (689 aa)
	LOC101065618	E3 ubiquitin-protein ligase RNF31-like isoform X1. (704 aa)
	spata2	Spermatogenesis associated 2. (560 aa)
	sharpin	SHANK-associated RH domain interacting protein. (493 aa)
	LOC101065898	OTU deubiquitinase with linear linkage specificity. (695 aa)
	bcl3	ANK_REP_REGION domain-containing protein. (257 aa)
	lsp1	Lymphocyte-specific protein 1. (449 aa)
	LOC101064989	Sharpin and rbck1 related. (710 aa)
	cyld	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family. (980 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000000520	LOC101064989	ENSTRUP00000000520	ENSTRUP00000079758	Ubiquitin carboxyl-terminal hydrolase CYLD-like.	Sharpin and rbck1 related.	0.504
ENSTRUP00000000520	LOC101065618	ENSTRUP00000000520	ENSTRUP00000053132	Ubiquitin carboxyl-terminal hydrolase CYLD-like.	E3 ubiquitin-protein ligase RNF31-like isoform X1.	0.646
ENSTRUP00000000520	LOC101068646	ENSTRUP00000000520	ENSTRUP00000024863	Ubiquitin carboxyl-terminal hydrolase CYLD-like.	E3 ubiquitin-protein ligase RNF31-like.	0.646
ENSTRUP00000000520	LOC101078865	ENSTRUP00000000520	ENSTRUP00000052763	Ubiquitin carboxyl-terminal hydrolase CYLD-like.	Cylindromatosis (turban tumor syndrome), b.	0.907
ENSTRUP00000000520	LOC115247907	ENSTRUP00000000520	ENSTRUP00000010647	Ubiquitin carboxyl-terminal hydrolase CYLD-like.	Si:dkey-181m9.8.	0.646
ENSTRUP00000000520	bcl3	ENSTRUP00000000520	ENSTRUP00000066448	Ubiquitin carboxyl-terminal hydrolase CYLD-like.	ANK_REP_REGION domain-containing protein.	0.925
ENSTRUP00000000520	cyld	ENSTRUP00000000520	ENSTRUP00000083915	Ubiquitin carboxyl-terminal hydrolase CYLD-like.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.905
ENSTRUP00000000520	lsp1	ENSTRUP00000000520	ENSTRUP00000068750	Ubiquitin carboxyl-terminal hydrolase CYLD-like.	Lymphocyte-specific protein 1.	0.906
ENSTRUP00000000520	rbck1	ENSTRUP00000000520	ENSTRUP00000029671	Ubiquitin carboxyl-terminal hydrolase CYLD-like.	RanBP-type and C3HC4-type zinc finger containing 1.	0.504
ENSTRUP00000000520	rnf31	ENSTRUP00000000520	ENSTRUP00000045452	Ubiquitin carboxyl-terminal hydrolase CYLD-like.	Uncharacterized protein.	0.646
ENSTRUP00000000520	sharpin	ENSTRUP00000000520	ENSTRUP00000059976	Ubiquitin carboxyl-terminal hydrolase CYLD-like.	SHANK-associated RH domain interacting protein.	0.568
ENSTRUP00000000520	spata2	ENSTRUP00000000520	ENSTRUP00000054113	Ubiquitin carboxyl-terminal hydrolase CYLD-like.	Spermatogenesis associated 2.	0.949
ENSTRUP00000000520	spata2l	ENSTRUP00000000520	ENSTRUP00000052471	Ubiquitin carboxyl-terminal hydrolase CYLD-like.	Spermatogenesis associated 2-like.	0.910
LOC101064989	ENSTRUP00000000520	ENSTRUP00000079758	ENSTRUP00000000520	Sharpin and rbck1 related.	Ubiquitin carboxyl-terminal hydrolase CYLD-like.	0.504
LOC101064989	LOC101065618	ENSTRUP00000079758	ENSTRUP00000053132	Sharpin and rbck1 related.	E3 ubiquitin-protein ligase RNF31-like isoform X1.	0.982
LOC101064989	LOC101065898	ENSTRUP00000079758	ENSTRUP00000062768	Sharpin and rbck1 related.	OTU deubiquitinase with linear linkage specificity.	0.803
LOC101064989	LOC101068646	ENSTRUP00000079758	ENSTRUP00000024863	Sharpin and rbck1 related.	E3 ubiquitin-protein ligase RNF31-like.	0.834
LOC101064989	LOC101078865	ENSTRUP00000079758	ENSTRUP00000052763	Sharpin and rbck1 related.	Cylindromatosis (turban tumor syndrome), b.	0.504
LOC101064989	LOC115247907	ENSTRUP00000079758	ENSTRUP00000010647	Sharpin and rbck1 related.	Si:dkey-181m9.8.	0.982
LOC101064989	cyld	ENSTRUP00000079758	ENSTRUP00000083915	Sharpin and rbck1 related.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.504