STRINGSTRING
LOC115247907 LOC115247907 rbck1 rbck1 rnf31 rnf31 spata2l spata2l LOC101078865 LOC101078865 LOC101065618 LOC101065618 spata2 spata2 sharpin sharpin LOC101064989 LOC101064989 cyld cyld
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC115247907Si:dkey-181m9.8. (704 aa)
rbck1RanBP-type and C3HC4-type zinc finger containing 1. (517 aa)
rnf31Uncharacterized protein. (1091 aa)
spata2lSpermatogenesis associated 2-like. (517 aa)
LOC101078865Cylindromatosis (turban tumor syndrome), b. (689 aa)
LOC101065618E3 ubiquitin-protein ligase RNF31-like isoform X1. (704 aa)
spata2Spermatogenesis associated 2. (560 aa)
sharpinSHANK-associated RH domain interacting protein. (493 aa)
LOC101064989Sharpin and rbck1 related. (710 aa)
cyldCylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family. (980 aa)
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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