STRINGSTRING
LOC101061450 LOC101061450 ACTC1 ACTC1 myhm86-1 myhm86-1 actn3 actn3 TPM3 TPM3 LOC101072885-2 LOC101072885-2 tpm1-2 tpm1-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101061450Myosin, light chain 13. (189 aa)
ACTC1Actin, alpha skeletal muscle B, intermediate form; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. (377 aa)
myhm86-1Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1969 aa)
actn3Actinin alpha 3b. (902 aa)
TPM3Tropomyosin3; Belongs to the tropomyosin family. (355 aa)
LOC101072885-2Actin, alpha anomalous; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. (424 aa)
tpm1-2Skeletal muscle tropomyosin1-2; Belongs to the tropomyosin family. (303 aa)
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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