10 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101069563	V-SNARE coiled-coil homology domain-containing protein. (114 aa)
	snap25	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (204 aa)
	LOC101063396	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (323 aa)
	LOC101072029	Vesicle-associated membrane protein 1. (175 aa)
	LOC101064639	t-SNARE coiled-coil homology domain-containing protein. (287 aa)
	LOC101079537	Synaptotagmin Ia. (519 aa)
	ENSTRUP00000076224	annotation not available (118 aa)
	LOC101063708	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (207 aa)
	stxbp3	Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (591 aa)
	LOC101079930	Complexin 2. (133 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000076224	LOC101063396	ENSTRUP00000076224	ENSTRUP00000035260	annotation not available	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.723
ENSTRUP00000076224	LOC101063708	ENSTRUP00000076224	ENSTRUP00000082861	annotation not available	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.842
ENSTRUP00000076224	LOC101064639	ENSTRUP00000076224	ENSTRUP00000068318	annotation not available	t-SNARE coiled-coil homology domain-containing protein.	0.723
ENSTRUP00000076224	LOC101069563	ENSTRUP00000076224	ENSTRUP00000011373	annotation not available	V-SNARE coiled-coil homology domain-containing protein.	0.686
ENSTRUP00000076224	LOC101072029	ENSTRUP00000076224	ENSTRUP00000062594	annotation not available	Vesicle-associated membrane protein 1.	0.686
ENSTRUP00000076224	LOC101079537	ENSTRUP00000076224	ENSTRUP00000072607	annotation not available	Synaptotagmin Ia.	0.694
ENSTRUP00000076224	LOC101079930	ENSTRUP00000076224	ENSTRUP00000086808	annotation not available	Complexin 2.	0.641
ENSTRUP00000076224	snap25	ENSTRUP00000076224	ENSTRUP00000020803	annotation not available	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.961
ENSTRUP00000076224	stxbp3	ENSTRUP00000076224	ENSTRUP00000086304	annotation not available	Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family.	0.631
LOC101063396	ENSTRUP00000076224	ENSTRUP00000035260	ENSTRUP00000076224	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	annotation not available	0.723
LOC101063396	LOC101063708	ENSTRUP00000035260	ENSTRUP00000082861	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.731
LOC101063396	LOC101069563	ENSTRUP00000035260	ENSTRUP00000011373	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	V-SNARE coiled-coil homology domain-containing protein.	0.904
LOC101063396	LOC101072029	ENSTRUP00000035260	ENSTRUP00000062594	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Vesicle-associated membrane protein 1.	0.737
LOC101063396	LOC101079537	ENSTRUP00000035260	ENSTRUP00000072607	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Synaptotagmin Ia.	0.528
LOC101063396	LOC101079930	ENSTRUP00000035260	ENSTRUP00000086808	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Complexin 2.	0.739
LOC101063396	snap25	ENSTRUP00000035260	ENSTRUP00000020803	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.886
LOC101063396	stxbp3	ENSTRUP00000035260	ENSTRUP00000086304	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family.	0.749
LOC101063708	ENSTRUP00000076224	ENSTRUP00000082861	ENSTRUP00000076224	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	annotation not available	0.842
LOC101063708	LOC101063396	ENSTRUP00000082861	ENSTRUP00000035260	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.731
LOC101063708	LOC101064639	ENSTRUP00000082861	ENSTRUP00000068318	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	t-SNARE coiled-coil homology domain-containing protein.	0.748