(35 nodes) Mixed, incl. The ELM2 (Egl-27 and MTA1 homology 2) domain is a small domain of unknown function. It is found in the MTA1 protein that is part of the NuRD complex PUBMED:10226007. The domain is usually found to the N terminus of a myb-like DNA binding domain SANT ..., and Cul2-RING ubiquitin ligase complex network (Takifugu rubripes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	dnttip1	Deoxynucleotidyltransferase terminal-interacting protein 1. (303 aa)
	zswim5	Zinc finger, SWIM-type containing 5. (1152 aa)
	LOC101079668	Zgc:162879. (663 aa)
	SLC15A1	Solute carrier family 15 member 1b. (731 aa)
	CAAP1	Uncharacterized protein. (293 aa)
	ccdc174	Coiled-coil domain containing 174. (543 aa)
	mier1	Mesoderm induction early response 1b, transcriptional regulator. (521 aa)
	zbtb44	Zinc finger and BTB domain containing 44. (667 aa)
	ghsr	Growth hormone secretagogue receptor b; Belongs to the G-protein coupled receptor 1 family. (377 aa)
	bahd1	Bromo adjacent homology domain containing 1. (848 aa)
	H2URK1_TAKRU	Angel homolog 1 (Drosophila). (701 aa)
	BFAR	Bifunctional apoptosis regulator. (450 aa)
	LOC101065456	ELM2 and Myb/SANT-like domain containing 1a. (1049 aa)
	LOC101064312	Uncharacterized protein. (459 aa)
	LOC101072247	PPP1R35_C domain-containing protein. (271 aa)
	mier3	Mesoderm induction early response 1, family member 3 b. (565 aa)
	tatdn2	TatD DNase domain containing 2. (120 aa)
	TMEM65	Transmembrane protein 65. (248 aa)
	LOC101061062	BAH domain-containing protein. (871 aa)
	ttc9	Tetratricopeptide repeat domain 9. (243 aa)
	fndc3a	Fibronectin type III domain containing 3A. (1253 aa)
	LOC101069029	Zinc finger, SWIM-type containing 8. (2255 aa)
	LOC115250679	Uncharacterized protein LOC115250679. (233 aa)
	ccdc51	Coiled-coil domain containing 51. (385 aa)
	LOC101068059	ELM2 and Myb/SANT-like domain containing 1b. (1088 aa)
	ENSTRUP00000063953	annotation not available (168 aa)
	LOC101064002	Solute carrier family 15 member 2. (702 aa)
	LOC101062012	Zinc finger, SWIM-type containing 6. (1129 aa)
	ZSWIM6	Zinc finger SWIM-type containing 6. (1172 aa)
	LOC105416858	Uncharacterized protein LOC105416858 isoform X1. (944 aa)
	LOC101075595	Transcriptional-regulating factor 1-like isoform X1. (734 aa)
	pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1. (757 aa)
	ENSTRUP00000082599	Cytospin-A-like. (676 aa)
	ENSTRUP00000085276	annotation not available (468 aa)
	fndc3b	Fibronectin type III domain containing 3Ba. (1224 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BFAR	CAAP1	ENSTRUP00000040054	ENSTRUP00000019410	Bifunctional apoptosis regulator.	Uncharacterized protein.	0.510
BFAR	pdxdc1	ENSTRUP00000040054	ENSTRUP00000082027	Bifunctional apoptosis regulator.	Pyridoxal-dependent decarboxylase domain containing 1.	0.566
CAAP1	BFAR	ENSTRUP00000019410	ENSTRUP00000040054	Uncharacterized protein.	Bifunctional apoptosis regulator.	0.510
CAAP1	LOC101069029	ENSTRUP00000019410	ENSTRUP00000058487	Uncharacterized protein.	Zinc finger, SWIM-type containing 8.	0.547
ENSTRUP00000085276	ccdc51	ENSTRUP00000085276	ENSTRUP00000061130	annotation not available	Coiled-coil domain containing 51.	0.433
LOC101061062	LOC115250679	ENSTRUP00000055401	ENSTRUP00000060827	BAH domain-containing protein.	Uncharacterized protein LOC115250679.	0.493
LOC101061062	mier1	ENSTRUP00000055401	ENSTRUP00000029326	BAH domain-containing protein.	Mesoderm induction early response 1b, transcriptional regulator.	0.458
LOC101061062	mier3	ENSTRUP00000055401	ENSTRUP00000052592	BAH domain-containing protein.	Mesoderm induction early response 1, family member 3 b.	0.458
LOC101061062	pdxdc1	ENSTRUP00000055401	ENSTRUP00000082027	BAH domain-containing protein.	Pyridoxal-dependent decarboxylase domain containing 1.	0.432
LOC101064002	LOC101064312	ENSTRUP00000071812	ENSTRUP00000047857	Solute carrier family 15 member 2.	Uncharacterized protein.	0.507
LOC101064002	ccdc174	ENSTRUP00000071812	ENSTRUP00000028240	Solute carrier family 15 member 2.	Coiled-coil domain containing 174.	0.416
LOC101064002	fndc3a	ENSTRUP00000071812	ENSTRUP00000057243	Solute carrier family 15 member 2.	Fibronectin type III domain containing 3A.	0.458
LOC101064002	tatdn2	ENSTRUP00000071812	ENSTRUP00000054408	Solute carrier family 15 member 2.	TatD DNase domain containing 2.	0.462
LOC101064312	LOC101064002	ENSTRUP00000047857	ENSTRUP00000071812	Uncharacterized protein.	Solute carrier family 15 member 2.	0.507
LOC101064312	LOC101069029	ENSTRUP00000047857	ENSTRUP00000058487	Uncharacterized protein.	Zinc finger, SWIM-type containing 8.	0.635
LOC101064312	SLC15A1	ENSTRUP00000047857	ENSTRUP00000018595	Uncharacterized protein.	Solute carrier family 15 member 1b.	0.507
LOC101064312	zbtb44	ENSTRUP00000047857	ENSTRUP00000029330	Uncharacterized protein.	Zinc finger and BTB domain containing 44.	0.657
LOC101065456	LOC101075595	ENSTRUP00000046345	ENSTRUP00000081216	ELM2 and Myb/SANT-like domain containing 1a.	Transcriptional-regulating factor 1-like isoform X1.	0.533
LOC101065456	LOC105416858	ENSTRUP00000046345	ENSTRUP00000077826	ELM2 and Myb/SANT-like domain containing 1a.	Uncharacterized protein LOC105416858 isoform X1.	0.400
LOC101065456	dnttip1	ENSTRUP00000046345	ENSTRUP00000001750	ELM2 and Myb/SANT-like domain containing 1a.	Deoxynucleotidyltransferase terminal-interacting protein 1.	0.903