(26 nodes) Mixed, incl. Yip1 domain, and Derlin-1-VIMP complex network (Takifugu rubripes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC115251968	Selenoprotein S-like. (154 aa)
	yipf4	Protein YIPF. (237 aa)
	yif1b	Yip1 interacting factor homolog B (S. cerevisiae). (303 aa)
	yipf3	Yip1 domain family, member 3. (343 aa)
	LOC101065112	Golgi apparatus membrane protein TVP23 homolog. (197 aa)
	myo16	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1915 aa)
	yipf5	Protein YIPF. (257 aa)
	LOC101062766	Zgc:103681. (340 aa)
	rabac1	PRA1 family protein. (207 aa)
	LOC101071194	Transmembrane protein 41ab. (270 aa)
	tmem41a	Transmembrane protein 41aa. (280 aa)
	slc66a3	Solute carrier family 66 member 3. (206 aa)
	yipf1	Protein YIPF. (295 aa)
	TMEM60	Uncharacterized protein. (134 aa)
	yif1a	Yip1 interacting factor homolog A (S. cerevisiae). (308 aa)
	mpc2	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family. (126 aa)
	LOC101066564	Golgi apparatus membrane protein TVP23 homolog. (215 aa)
	LOC101066417	Protein YIPF. (300 aa)
	LOC101073251	Uncharacterized protein. (82 aa)
	ENSTRUP00000041938	Chromosome 12 open reading frame 49. (260 aa)
	tmem167b	Protein kish; Involved in the early part of the secretory pathway. (74 aa)
	tmem60	Transmembrane protein 60. (133 aa)
	selenos	Selenoprotein S. (174 aa)
	H2RVP2_TAKRU	Uncharacterized protein. (116 aa)
	mpc1	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family. (128 aa)
	ENSTRUP00000077339	Selenoprotein S. (214 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000041938	mpc2	ENSTRUP00000041938	ENSTRUP00000030865	Chromosome 12 open reading frame 49.	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.	0.403
ENSTRUP00000077339	H2RVP2_TAKRU	ENSTRUP00000077339	ENSTRUP00000071104	Selenoprotein S.	Uncharacterized protein.	0.404
ENSTRUP00000077339	LOC101066417	ENSTRUP00000077339	ENSTRUP00000032371	Selenoprotein S.	Protein YIPF.	0.572
ENSTRUP00000077339	LOC101073251	ENSTRUP00000077339	ENSTRUP00000038960	Selenoprotein S.	Uncharacterized protein.	0.404
ENSTRUP00000077339	rabac1	ENSTRUP00000077339	ENSTRUP00000020300	Selenoprotein S.	PRA1 family protein.	0.523
ENSTRUP00000077339	yif1a	ENSTRUP00000077339	ENSTRUP00000030777	Selenoprotein S.	Yip1 interacting factor homolog A (S. cerevisiae).	0.649
ENSTRUP00000077339	yif1b	ENSTRUP00000077339	ENSTRUP00000007041	Selenoprotein S.	Yip1 interacting factor homolog B (S. cerevisiae).	0.649
ENSTRUP00000077339	yipf1	ENSTRUP00000077339	ENSTRUP00000030000	Selenoprotein S.	Protein YIPF.	0.572
ENSTRUP00000077339	yipf3	ENSTRUP00000077339	ENSTRUP00000008226	Selenoprotein S.	Yip1 domain family, member 3.	0.576
H2RVP2_TAKRU	ENSTRUP00000077339	ENSTRUP00000071104	ENSTRUP00000077339	Uncharacterized protein.	Selenoprotein S.	0.404
H2RVP2_TAKRU	LOC115251968	ENSTRUP00000071104	ENSTRUP00000000149	Uncharacterized protein.	Selenoprotein S-like.	0.404
H2RVP2_TAKRU	selenos	ENSTRUP00000071104	ENSTRUP00000070822	Uncharacterized protein.	Selenoprotein S.	0.404
H2RVP2_TAKRU	yipf5	ENSTRUP00000071104	ENSTRUP00000015281	Uncharacterized protein.	Protein YIPF.	0.479
LOC101065112	LOC101066417	ENSTRUP00000010148	ENSTRUP00000032371	Golgi apparatus membrane protein TVP23 homolog.	Protein YIPF.	0.619
LOC101065112	yipf1	ENSTRUP00000010148	ENSTRUP00000030000	Golgi apparatus membrane protein TVP23 homolog.	Protein YIPF.	0.619
LOC101065112	yipf3	ENSTRUP00000010148	ENSTRUP00000008226	Golgi apparatus membrane protein TVP23 homolog.	Yip1 domain family, member 3.	0.601
LOC101066417	ENSTRUP00000077339	ENSTRUP00000032371	ENSTRUP00000077339	Protein YIPF.	Selenoprotein S.	0.572
LOC101066417	LOC101065112	ENSTRUP00000032371	ENSTRUP00000010148	Protein YIPF.	Golgi apparatus membrane protein TVP23 homolog.	0.619
LOC101066417	LOC101066564	ENSTRUP00000032371	ENSTRUP00000031200	Protein YIPF.	Golgi apparatus membrane protein TVP23 homolog.	0.619
LOC101066417	LOC115251968	ENSTRUP00000032371	ENSTRUP00000000149	Protein YIPF.	Selenoprotein S-like.	0.572