(36 nodes) Mixed, incl. Transport of nucleotide sugars, and EamA-like transporter family network (Takifugu rubripes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101072876	Uncharacterized protein. (334 aa)
	SLC35A4	Solute carrier family 35 member A4. (322 aa)
	slc35e1	Solute carrier family 35 member E1. (378 aa)
	slc35e3	Solute carrier family 35 member E3. (310 aa)
	nipa1	NIPA magnesium transporter 1. (304 aa)
	LOC101065535	Solute carrier family 35 member F2. (392 aa)
	LOC101068322	Si:ch211-87m7.2. (472 aa)
	LOC101071493	Uncharacterized protein. (451 aa)
	slc35a5	Solute carrier family 35 member A5. (422 aa)
	ENSTRUP00000041753	annotation not available (463 aa)
	slc35f6	Solute carrier family 35 member F6. (377 aa)
	slc35a3	Solute carrier family 35 member A3a. (326 aa)
	smap2	Small ArfGAP2. (450 aa)
	slc35a1	Solute carrier family 35 member A1. (345 aa)
	slc35b4	Solute carrier family 35 member B4. (332 aa)
	luzp2	Leucine zipper protein 2. (350 aa)
	slc35d2	Solute carrier family 35 member D2. (337 aa)
	slc35b3	Solute carrier family 35 member B3. (439 aa)
	ENSTRUP00000054432	Solute carrier family 35 member G2b. (447 aa)
	slc35g1	Solute carrier family 35 member G1. (410 aa)
	B3GNT3-2	Hexosyltransferase. (379 aa)
	mfsd14a	Hippocampus abundant transcript 1a. (490 aa)
	LOC101078039	Solute carrier family 35 member D1a. (351 aa)
	ENSTRUP00000061312	Hexosyltransferase. (396 aa)
	man1a2	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (674 aa)
	slc30a1	Uncharacterized protein. (487 aa)
	LOC101078685	MFS domain-containing protein. (524 aa)
	B3GNT3-3	Hexosyltransferase. (396 aa)
	LOC115249526	Si:ch211-248a14.8. (299 aa)
	slc35b2	Solute carrier family 35 member B2. (432 aa)
	ENSTRUP00000077411	annotation not available (396 aa)
	slc35c1	Solute carrier family 35 member C1. (396 aa)
	slc35a2	Solute carrier family 35 member 2. (376 aa)
	sppl3	Signal peptide peptidase 3. (389 aa)
	slc35f3	Solute carrier family 35 member F3b. (473 aa)
	SLC35F5	Solute carrier family 35 member F5. (496 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3GNT3-2	LOC101072876	ENSTRUP00000056756	ENSTRUP00000005590	Hexosyltransferase.	Uncharacterized protein.	0.404
B3GNT3-2	slc35a2	ENSTRUP00000056756	ENSTRUP00000078566	Hexosyltransferase.	Solute carrier family 35 member 2.	0.404
B3GNT3-2	slc35a3	ENSTRUP00000056756	ENSTRUP00000045642	Hexosyltransferase.	Solute carrier family 35 member A3a.	0.404
B3GNT3-3	LOC101072876	ENSTRUP00000068876	ENSTRUP00000005590	Hexosyltransferase.	Uncharacterized protein.	0.404
B3GNT3-3	slc35a2	ENSTRUP00000068876	ENSTRUP00000078566	Hexosyltransferase.	Solute carrier family 35 member 2.	0.404
B3GNT3-3	slc35a3	ENSTRUP00000068876	ENSTRUP00000045642	Hexosyltransferase.	Solute carrier family 35 member A3a.	0.404
ENSTRUP00000041753	LOC101078039	ENSTRUP00000041753	ENSTRUP00000060322	annotation not available	Solute carrier family 35 member D1a.	0.678
ENSTRUP00000041753	nipa1	ENSTRUP00000041753	ENSTRUP00000024268	annotation not available	NIPA magnesium transporter 1.	0.456
ENSTRUP00000041753	slc30a1	ENSTRUP00000041753	ENSTRUP00000067088	annotation not available	Uncharacterized protein.	0.455
ENSTRUP00000041753	slc35a1	ENSTRUP00000041753	ENSTRUP00000051032	annotation not available	Solute carrier family 35 member A1.	0.650
ENSTRUP00000041753	slc35b3	ENSTRUP00000041753	ENSTRUP00000054224	annotation not available	Solute carrier family 35 member B3.	0.480
ENSTRUP00000041753	slc35c1	ENSTRUP00000041753	ENSTRUP00000078229	annotation not available	Solute carrier family 35 member C1.	0.688
ENSTRUP00000041753	slc35e3	ENSTRUP00000041753	ENSTRUP00000019096	annotation not available	Solute carrier family 35 member E3.	0.690
ENSTRUP00000054432	SLC35F5	ENSTRUP00000054432	ENSTRUP00000085333	Solute carrier family 35 member G2b.	Solute carrier family 35 member F5.	0.565
ENSTRUP00000054432	slc35c1	ENSTRUP00000054432	ENSTRUP00000078229	Solute carrier family 35 member G2b.	Solute carrier family 35 member C1.	0.403
ENSTRUP00000061312	LOC101072876	ENSTRUP00000061312	ENSTRUP00000005590	Hexosyltransferase.	Uncharacterized protein.	0.404
ENSTRUP00000061312	slc35a2	ENSTRUP00000061312	ENSTRUP00000078566	Hexosyltransferase.	Solute carrier family 35 member 2.	0.404
ENSTRUP00000061312	slc35a3	ENSTRUP00000061312	ENSTRUP00000045642	Hexosyltransferase.	Solute carrier family 35 member A3a.	0.404
ENSTRUP00000077411	LOC101072876	ENSTRUP00000077411	ENSTRUP00000005590	annotation not available	Uncharacterized protein.	0.404
ENSTRUP00000077411	slc35a2	ENSTRUP00000077411	ENSTRUP00000078566	annotation not available	Solute carrier family 35 member 2.	0.404