25 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Rps25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (85 aa)
	LOC101069505	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (306 aa)
	rps12	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (191 aa)
	rps2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
	H2TER7_TAKRU	Ribosomal protein S28. (53 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	Rps26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (111 aa)
	rps18	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (144 aa)
	rps3a	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
	rps9	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
	rpl12	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (168 aa)
	rps21	Ribosomal protein S21. (161 aa)
	rps6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	rps7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (198 aa)
	rps19	Ribosomal protein S19. (200 aa)
	rps16	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	RPS17	Ribosomal protein S17. (135 aa)
	rpl23a	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (181 aa)
	rps11	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (187 aa)
	ENSTRUP00000070071	annotation not available (74 aa)
	rps4x	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
	Rps23	Small subunit ribosomal protein S23e. (154 aa)
	rps24	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (132 aa)
	rps10	Ribosomal protein S10. (219 aa)
	rps8	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (219 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000070071	H2TER7_TAKRU	ENSTRUP00000070071	ENSTRUP00000023160	annotation not available	Ribosomal protein S28.	0.999
ENSTRUP00000070071	LOC101069505	ENSTRUP00000070071	ENSTRUP00000010856	annotation not available	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family.	0.999
ENSTRUP00000070071	RPS17	ENSTRUP00000070071	ENSTRUP00000063959	annotation not available	Ribosomal protein S17.	0.999
ENSTRUP00000070071	Rps23	ENSTRUP00000070071	ENSTRUP00000077931	annotation not available	Small subunit ribosomal protein S23e.	0.999
ENSTRUP00000070071	Rps25	ENSTRUP00000070071	ENSTRUP00000001294	annotation not available	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999
ENSTRUP00000070071	Rps26	ENSTRUP00000070071	ENSTRUP00000030482	annotation not available	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
ENSTRUP00000070071	rpl12	ENSTRUP00000070071	ENSTRUP00000049929	annotation not available	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	0.999
ENSTRUP00000070071	rpl23a	ENSTRUP00000070071	ENSTRUP00000068150	annotation not available	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	0.998
ENSTRUP00000070071	rps10	ENSTRUP00000070071	ENSTRUP00000084721	annotation not available	Ribosomal protein S10.	0.999
ENSTRUP00000070071	rps11	ENSTRUP00000070071	ENSTRUP00000068429	annotation not available	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.999
ENSTRUP00000070071	rps12	ENSTRUP00000070071	ENSTRUP00000011645	annotation not available	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.994
ENSTRUP00000070071	rps16	ENSTRUP00000070071	ENSTRUP00000061221	annotation not available	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.999
ENSTRUP00000070071	rps18	ENSTRUP00000070071	ENSTRUP00000034159	annotation not available	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.	0.999
ENSTRUP00000070071	rps19	ENSTRUP00000070071	ENSTRUP00000057976	annotation not available	Ribosomal protein S19.	0.999
ENSTRUP00000070071	rps2	ENSTRUP00000070071	ENSTRUP00000016765	annotation not available	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.999
ENSTRUP00000070071	rps21	ENSTRUP00000070071	ENSTRUP00000051336	annotation not available	Ribosomal protein S21.	0.999
ENSTRUP00000070071	rps24	ENSTRUP00000070071	ENSTRUP00000082261	annotation not available	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
ENSTRUP00000070071	rps27a	ENSTRUP00000070071	ENSTRUP00000027679	annotation not available	Ribosomal protein S27a.	0.999
ENSTRUP00000070071	rps3a	ENSTRUP00000070071	ENSTRUP00000038638	annotation not available	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
ENSTRUP00000070071	rps4x	ENSTRUP00000070071	ENSTRUP00000072738	annotation not available	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.999