STRINGSTRING
H2VA08_TAKRU H2VA08_TAKRU LOC101078882 LOC101078882 Rpl29 Rpl29 rpl35 rpl35 rplp2 rplp2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H2VA08_TAKRURibosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (72 aa)
LOC101078882Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (147 aa)
Rpl2960S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (137 aa)
rpl35Ribosomal protein L35. (135 aa)
rplp2Ribosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (140 aa)
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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