14 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ppp1r42	Protein phosphatase 1, regulatory subunit 42. (276 aa)
	cops7a	COP9 constitutive photomorphogenic homolog subunit 7A. (268 aa)
	ddb2	Damage-specific DNA binding protein 2. (518 aa)
	ddb1	Damage-specific DNA binding protein 1. (1140 aa)
	cops2	COP9 signalosome subunit 2. (483 aa)
	cops4	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (415 aa)
	cops8	COP9 signalosome subunit 8. (216 aa)
	cul4b	Cullin 4B; Belongs to the cullin family. (914 aa)
	cul4a	Cullin 4A; Belongs to the cullin family. (741 aa)
	COPS6	COP9 signalosome subunit 6. (330 aa)
	dtl	Denticleless E3 ubiquitin protein ligase homolog (Drosophila). (707 aa)
	arfgef1-2	ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited). (346 aa)
	gps1	G protein pathway suppressor 1. (500 aa)
	cops3	COP9 signalosome subunit 3. (430 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COPS6	arfgef1-2	ENSTRUP00000065015	ENSTRUP00000070411	COP9 signalosome subunit 6.	ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited).	0.998
COPS6	cops2	ENSTRUP00000065015	ENSTRUP00000043337	COP9 signalosome subunit 6.	COP9 signalosome subunit 2.	0.999
COPS6	cops3	ENSTRUP00000065015	ENSTRUP00000082863	COP9 signalosome subunit 6.	COP9 signalosome subunit 3.	0.999
COPS6	cops4	ENSTRUP00000065015	ENSTRUP00000053695	COP9 signalosome subunit 6.	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).	0.999
COPS6	cops7a	ENSTRUP00000065015	ENSTRUP00000027578	COP9 signalosome subunit 6.	COP9 constitutive photomorphogenic homolog subunit 7A.	0.996
COPS6	cops8	ENSTRUP00000065015	ENSTRUP00000059629	COP9 signalosome subunit 6.	COP9 signalosome subunit 8.	0.998
COPS6	cul4a	ENSTRUP00000065015	ENSTRUP00000064210	COP9 signalosome subunit 6.	Cullin 4A; Belongs to the cullin family.	0.888
COPS6	cul4b	ENSTRUP00000065015	ENSTRUP00000061608	COP9 signalosome subunit 6.	Cullin 4B; Belongs to the cullin family.	0.888
COPS6	ddb1	ENSTRUP00000065015	ENSTRUP00000042679	COP9 signalosome subunit 6.	Damage-specific DNA binding protein 1.	0.882
COPS6	ddb2	ENSTRUP00000065015	ENSTRUP00000039019	COP9 signalosome subunit 6.	Damage-specific DNA binding protein 2.	0.853
COPS6	dtl	ENSTRUP00000065015	ENSTRUP00000067730	COP9 signalosome subunit 6.	Denticleless E3 ubiquitin protein ligase homolog (Drosophila).	0.673
COPS6	gps1	ENSTRUP00000065015	ENSTRUP00000073121	COP9 signalosome subunit 6.	G protein pathway suppressor 1.	0.999
COPS6	ppp1r42	ENSTRUP00000065015	ENSTRUP00000023583	COP9 signalosome subunit 6.	Protein phosphatase 1, regulatory subunit 42.	0.977
arfgef1-2	COPS6	ENSTRUP00000070411	ENSTRUP00000065015	ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited).	COP9 signalosome subunit 6.	0.998
arfgef1-2	cops2	ENSTRUP00000070411	ENSTRUP00000043337	ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited).	COP9 signalosome subunit 2.	0.999
arfgef1-2	cops3	ENSTRUP00000070411	ENSTRUP00000082863	ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited).	COP9 signalosome subunit 3.	0.998
arfgef1-2	cops4	ENSTRUP00000070411	ENSTRUP00000053695	ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited).	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).	0.999
arfgef1-2	cops7a	ENSTRUP00000070411	ENSTRUP00000027578	ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited).	COP9 constitutive photomorphogenic homolog subunit 7A.	0.987
arfgef1-2	cops8	ENSTRUP00000070411	ENSTRUP00000059629	ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited).	COP9 signalosome subunit 8.	0.998
arfgef1-2	cul4a	ENSTRUP00000070411	ENSTRUP00000064210	ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited).	Cullin 4A; Belongs to the cullin family.	0.906