64 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rnf170	Ring finger protein 170. (261 aa)
	fign	Fidgetin; Belongs to the AAA ATPase family. (746 aa)
	march11	Membrane-associated ring finger (C3HC4) 11. (291 aa)
	faf1	Fas (TNFRSF6) associated factor 1. (669 aa)
	LOC101077113	Si:dkey-24p1.6. (1047 aa)
	plaa	Phospholipase A2-activating protein. (796 aa)
	RNF5	RING-type domain-containing protein. (223 aa)
	rnf139	Ring finger protein 139. (702 aa)
	ubr2	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1754 aa)
	ubxn2a	UBX domain protein 2A. (245 aa)
	LOC101073729	Ataxin 3. (223 aa)
	LOC101072295	Nuclear VCP like; Belongs to the AAA ATPase family. (860 aa)
	C17h6orf120	Zgc:77929. (112 aa)
	aup1	AUP1 lipid droplet regulating VLDL assembly factor. (411 aa)
	nsfl1c	NSFL1 (p97) cofactor (p47). (372 aa)
	marchf6	Membrane-associated ring finger (C3HC4) 6. (915 aa)
	LOC101062733	Zmp:0000000662. (724 aa)
	cgrrf1	Cell growth regulator with ring finger domain 1. (396 aa)
	ubac2	UBA domain containing 2. (353 aa)
	faf2	Fas associated factor family member 2. (445 aa)
	yod1	YOD1 deubiquitinase. (306 aa)
	ubxn11	UBX domain protein 11. (421 aa)
	chfr	Checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase. (627 aa)
	LOC105417910	Uncharacterized protein. (848 aa)
	sel1l	SEL1L adaptor subunit of ERAD E3 ubiquitin ligase. (823 aa)
	rnf145	Ring finger protein 145b. (736 aa)
	ubqln4	Ubiquilin 4. (631 aa)
	ubxn1	UBX domain protein 1. (314 aa)
	LOC101067335	Family with sequence similarity 8 member A1a. (356 aa)
	UBXN4	UBX domain protein 4. (494 aa)
	ube4a	Ubiquitination factor E4A (UFD2 homolog, yeast). (1078 aa)
	LOC101066054	Ring finger protein 121. (333 aa)
	erlec1	Endoplasmic reticulum lectin 1. (455 aa)
	FAAP100	Uncharacterized protein. (824 aa)
	spata5l1	Spermatogenesis associated 5-like 1. (746 aa)
	vcp	Valosin containing protein; Belongs to the AAA ATPase family. (819 aa)
	SCAMP1	Secretory carrier-associated membrane protein. (330 aa)
	ubxn6	UBX domain protein 6. (437 aa)
	LOC101076602	Cytochrome c oxidase assembly factor 7. (230 aa)
	dele1	Uncharacterized protein. (526 aa)
	derl2	Derlin-2/3. (239 aa)
	svip	Si:ch73-147o17.1. (115 aa)
	rnf185	Ring finger protein 185. (190 aa)
	tmub1	Transmembrane and ubiquitin-like domain containing 1. (261 aa)
	LOC101071204	AAA domain-containing protein; Belongs to the AAA ATPase family. (768 aa)
	LOC115248097	Peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase-like. (635 aa)
	UBXN7	UBX domain protein 7. (521 aa)
	LOC101074148	Membrane-associated ring finger (C3HC4) 2. (248 aa)
	SPATA5	ATPase family protein 2 homolog. (889 aa)
	KCNH7	Potassium voltage-gated channel subfamily H member 7. (1068 aa)
	hm13	Histocompatibility (minor) 13. (417 aa)
	LOC101067994	ER lipid raft associated 1. (355 aa)
	marchf7	Membrane-associated ring finger (C3HC4) 7. (764 aa)
	LOC101070973	Potassium channel, voltage gated eag related subfamily H, member 7. (1200 aa)
	LOC101078497	Secretory carrier membrane protein 1. (493 aa)
	ube4b	Ubiquitination factor E4B, UFD2 homolog (S. cerevisiae). (1378 aa)
	os9	OS9 endoplasmic reticulum lectin. (656 aa)
	NGLY1	N-glycanase 1. (635 aa)
	syvn1	Synovial apoptosis inhibitor 1, synoviolin. (625 aa)
	ENSTRUP00000080100	Nuclear VCP like. (860 aa)
	LOC101072418	Cholesterol 25-hydroxylase like 3. (358 aa)
	aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing. (618 aa)
	amfr	Autocrine motility factor receptor b. (645 aa)
	LOC101075280	E3 ubiquitin-protein ligase MARCH6-like. (911 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C17h6orf120	LOC101067994	ENSTRUP00000015401	ENSTRUP00000066762	Zgc:77929.	ER lipid raft associated 1.	0.433
C17h6orf120	LOC101072418	ENSTRUP00000015401	ENSTRUP00000082002	Zgc:77929.	Cholesterol 25-hydroxylase like 3.	0.433
C17h6orf120	rnf170	ENSTRUP00000015401	ENSTRUP00000001810	Zgc:77929.	Ring finger protein 170.	0.566
C17h6orf120	tmub1	ENSTRUP00000015401	ENSTRUP00000063163	Zgc:77929.	Transmembrane and ubiquitin-like domain containing 1.	0.566
ENSTRUP00000080100	FAAP100	ENSTRUP00000080100	ENSTRUP00000042865	Nuclear VCP like.	Uncharacterized protein.	0.698
ENSTRUP00000080100	LOC101062733	ENSTRUP00000080100	ENSTRUP00000023024	Nuclear VCP like.	Zmp:0000000662.	0.459
ENSTRUP00000080100	LOC101073729	ENSTRUP00000080100	ENSTRUP00000013923	Nuclear VCP like.	Ataxin 3.	0.645
ENSTRUP00000080100	LOC101076602	ENSTRUP00000080100	ENSTRUP00000047252	Nuclear VCP like.	Cytochrome c oxidase assembly factor 7.	0.410
ENSTRUP00000080100	LOC101077113	ENSTRUP00000080100	ENSTRUP00000004620	Nuclear VCP like.	Si:dkey-24p1.6.	0.410
ENSTRUP00000080100	LOC105417910	ENSTRUP00000080100	ENSTRUP00000034263	Nuclear VCP like.	Uncharacterized protein.	0.410
ENSTRUP00000080100	LOC115248097	ENSTRUP00000080100	ENSTRUP00000065255	Nuclear VCP like.	Peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase-like.	0.509
ENSTRUP00000080100	NGLY1	ENSTRUP00000080100	ENSTRUP00000076981	Nuclear VCP like.	N-glycanase 1.	0.509
ENSTRUP00000080100	UBXN4	ENSTRUP00000080100	ENSTRUP00000038224	Nuclear VCP like.	UBX domain protein 4.	0.470
ENSTRUP00000080100	UBXN7	ENSTRUP00000080100	ENSTRUP00000065925	Nuclear VCP like.	UBX domain protein 7.	0.909
ENSTRUP00000080100	amfr	ENSTRUP00000080100	ENSTRUP00000087254	Nuclear VCP like.	Autocrine motility factor receptor b.	0.459
ENSTRUP00000080100	aspscr1	ENSTRUP00000080100	ENSTRUP00000082456	Nuclear VCP like.	ASPSCR1 tether for SLC2A4, UBX domain containing.	0.449
ENSTRUP00000080100	chfr	ENSTRUP00000080100	ENSTRUP00000033200	Nuclear VCP like.	Checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase.	0.459
ENSTRUP00000080100	dele1	ENSTRUP00000080100	ENSTRUP00000049527	Nuclear VCP like.	Uncharacterized protein.	0.410
ENSTRUP00000080100	derl2	ENSTRUP00000080100	ENSTRUP00000049739	Nuclear VCP like.	Derlin-2/3.	0.727
ENSTRUP00000080100	erlec1	ENSTRUP00000080100	ENSTRUP00000041929	Nuclear VCP like.	Endoplasmic reticulum lectin 1.	0.605