(7 nodes) Mixed, incl. Erlin1/2, and E3 ubiquitin-protein ligase RNF5/RNF185-like network (Takifugu rubripes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rnf170	Ring finger protein 170. (261 aa)
	RNF5	RING-type domain-containing protein. (223 aa)
	C17h6orf120	Zgc:77929. (112 aa)
	rnf185	Ring finger protein 185. (190 aa)
	tmub1	Transmembrane and ubiquitin-like domain containing 1. (261 aa)
	LOC101067994	ER lipid raft associated 1. (355 aa)
	LOC101072418	Cholesterol 25-hydroxylase like 3. (358 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C17h6orf120	LOC101067994	ENSTRUP00000015401	ENSTRUP00000066762	Zgc:77929.	ER lipid raft associated 1.	0.433
C17h6orf120	LOC101072418	ENSTRUP00000015401	ENSTRUP00000082002	Zgc:77929.	Cholesterol 25-hydroxylase like 3.	0.433
C17h6orf120	rnf170	ENSTRUP00000015401	ENSTRUP00000001810	Zgc:77929.	Ring finger protein 170.	0.566
C17h6orf120	tmub1	ENSTRUP00000015401	ENSTRUP00000063163	Zgc:77929.	Transmembrane and ubiquitin-like domain containing 1.	0.566
LOC101067994	C17h6orf120	ENSTRUP00000066762	ENSTRUP00000015401	ER lipid raft associated 1.	Zgc:77929.	0.433
LOC101067994	LOC101072418	ENSTRUP00000066762	ENSTRUP00000082002	ER lipid raft associated 1.	Cholesterol 25-hydroxylase like 3.	0.582
LOC101067994	RNF5	ENSTRUP00000066762	ENSTRUP00000007466	ER lipid raft associated 1.	RING-type domain-containing protein.	0.658
LOC101067994	rnf170	ENSTRUP00000066762	ENSTRUP00000001810	ER lipid raft associated 1.	Ring finger protein 170.	0.644
LOC101067994	rnf185	ENSTRUP00000066762	ENSTRUP00000055903	ER lipid raft associated 1.	Ring finger protein 185.	0.658
LOC101067994	tmub1	ENSTRUP00000066762	ENSTRUP00000063163	ER lipid raft associated 1.	Transmembrane and ubiquitin-like domain containing 1.	0.639
LOC101072418	C17h6orf120	ENSTRUP00000082002	ENSTRUP00000015401	Cholesterol 25-hydroxylase like 3.	Zgc:77929.	0.433
LOC101072418	LOC101067994	ENSTRUP00000082002	ENSTRUP00000066762	Cholesterol 25-hydroxylase like 3.	ER lipid raft associated 1.	0.582
LOC101072418	RNF5	ENSTRUP00000082002	ENSTRUP00000007466	Cholesterol 25-hydroxylase like 3.	RING-type domain-containing protein.	0.658
LOC101072418	rnf170	ENSTRUP00000082002	ENSTRUP00000001810	Cholesterol 25-hydroxylase like 3.	Ring finger protein 170.	0.611
LOC101072418	rnf185	ENSTRUP00000082002	ENSTRUP00000055903	Cholesterol 25-hydroxylase like 3.	Ring finger protein 185.	0.658
LOC101072418	tmub1	ENSTRUP00000082002	ENSTRUP00000063163	Cholesterol 25-hydroxylase like 3.	Transmembrane and ubiquitin-like domain containing 1.	0.639
RNF5	LOC101067994	ENSTRUP00000007466	ENSTRUP00000066762	RING-type domain-containing protein.	ER lipid raft associated 1.	0.658
RNF5	LOC101072418	ENSTRUP00000007466	ENSTRUP00000082002	RING-type domain-containing protein.	Cholesterol 25-hydroxylase like 3.	0.658
RNF5	rnf185	ENSTRUP00000007466	ENSTRUP00000055903	RING-type domain-containing protein.	Ring finger protein 185.	0.914
RNF5	tmub1	ENSTRUP00000007466	ENSTRUP00000063163	RING-type domain-containing protein.	Transmembrane and ubiquitin-like domain containing 1.	0.472