(47 nodes) Mixed, incl. Ino80 complex, and DNA binding, bending network (Takifugu rubripes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ino80b	INO80 complex subunit B. (336 aa)
	baz2a	Bromodomain adjacent to zinc finger domain, 2A. (1081 aa)
	actr5	Actin related protein 5; Belongs to the actin family. (623 aa)
	LOC101067170	High mobility group box 1b. (196 aa)
	baz1b	Bromodomain adjacent to zinc finger domain, 1B. (1561 aa)
	actr8	Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (665 aa)
	BAZ1A	Bromodomain adjacent to zinc finger domain 1A. (1390 aa)
	nostrin	Nitric oxide synthase trafficking. (516 aa)
	tbl2	MYB binding protein (P160) 1a. (1279 aa)
	chd7	Chromodomain helicase DNA binding protein 7. (3247 aa)
	LOC101065917	High mobility group box 2a. (214 aa)
	LOC101062688	DEK_C domain-containing protein. (415 aa)
	ruvbl1	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
	YY1	YY1 transcription factor b. (419 aa)
	LOC101069989	Myosin IG; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1010 aa)
	LOC101074070	LRRCT domain-containing protein. (955 aa)
	ino80e	INO80 complex subunit E. (244 aa)
	LOC101071494	Uncharacterized protein. (349 aa)
	ino80	INO80 complex ATPase subunit. (1574 aa)
	smarca5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1035 aa)
	nfrkb	Nuclear factor related to kappaB binding protein. (1287 aa)
	acsl1	Acyl-CoA synthetase long chain family member 1a. (710 aa)
	actl6a	Actin-like 6A; Belongs to the actin family. (449 aa)
	LOC101076848	Myosin binding protein Hb. (539 aa)
	LOC101065591	Uncharacterized protein. (474 aa)
	ENSTRUP00000052089	Helicase ATP-binding domain-containing protein. (651 aa)
	tfpt	TCF3 (E2A) fusion partner. (207 aa)
	LOC101068513	SH3 and cysteine rich domain 2. (414 aa)
	LOC105416753	Uncharacterized protein. (461 aa)
	LOC115252686	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (460 aa)
	ENSTRUP00000060144	annotation not available (207 aa)
	LOC115252562	High mobility group-T protein-like. (263 aa)
	ENSTRUP00000067648	Uncharacterized protein LOC101072493. (491 aa)
	baz2b	Uncharacterized protein. (2396 aa)
	ENSTRUP00000069375	annotation not available (185 aa)
	H2TYB8_TAKRU	Helicase ATP-binding domain-containing protein. (876 aa)
	myo1c	Myosin Ic, paralog b; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1303 aa)
	LOC115250590	Mucin-2-like. (769 aa)
	LOC101067848	Chromatin accessibility complex subunit 1. (119 aa)
	ENSTRUP00000075413	annotation not available (267 aa)
	ino80d	INO80 complex subunit Da. (994 aa)
	LOC101068929	TH1 domain-containing protein. (1046 aa)
	ENSTRUP00000080474	LOW QUALITY PROTEIN: protein Shroom3-like. (101 aa)
	LOC101069109	High mobility group box 2b. (208 aa)
	LOC105416309	WW domain binding protein 1-like a. (253 aa)
	ENSTRUP00000088033	WW domain binding protein 1-like a. (253 aa)
	ino80c	INO80 complex subunit C. (253 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAZ1A	ENSTRUP00000052089	ENSTRUP00000018575	ENSTRUP00000052089	Bromodomain adjacent to zinc finger domain 1A.	Helicase ATP-binding domain-containing protein.	0.760
BAZ1A	H2TYB8_TAKRU	ENSTRUP00000018575	ENSTRUP00000070299	Bromodomain adjacent to zinc finger domain 1A.	Helicase ATP-binding domain-containing protein.	0.760
BAZ1A	LOC101062688	ENSTRUP00000018575	ENSTRUP00000025673	Bromodomain adjacent to zinc finger domain 1A.	DEK_C domain-containing protein.	0.646
BAZ1A	LOC101067848	ENSTRUP00000018575	ENSTRUP00000071893	Bromodomain adjacent to zinc finger domain 1A.	Chromatin accessibility complex subunit 1.	0.777
BAZ1A	LOC101068929	ENSTRUP00000018575	ENSTRUP00000079544	Bromodomain adjacent to zinc finger domain 1A.	TH1 domain-containing protein.	0.436
BAZ1A	LOC101069989	ENSTRUP00000018575	ENSTRUP00000027822	Bromodomain adjacent to zinc finger domain 1A.	Myosin IG; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.436
BAZ1A	baz1b	ENSTRUP00000018575	ENSTRUP00000014175	Bromodomain adjacent to zinc finger domain 1A.	Bromodomain adjacent to zinc finger domain, 1B.	0.416
BAZ1A	chd7	ENSTRUP00000018575	ENSTRUP00000021652	Bromodomain adjacent to zinc finger domain 1A.	Chromodomain helicase DNA binding protein 7.	0.583
BAZ1A	ino80	ENSTRUP00000018575	ENSTRUP00000033050	Bromodomain adjacent to zinc finger domain 1A.	INO80 complex ATPase subunit.	0.472
BAZ1A	myo1c	ENSTRUP00000018575	ENSTRUP00000070595	Bromodomain adjacent to zinc finger domain 1A.	Myosin Ic, paralog b; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.436
BAZ1A	smarca5	ENSTRUP00000018575	ENSTRUP00000036063	Bromodomain adjacent to zinc finger domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.990
BAZ1A	tbl2	ENSTRUP00000018575	ENSTRUP00000020973	Bromodomain adjacent to zinc finger domain 1A.	MYB binding protein (P160) 1a.	0.697
ENSTRUP00000052089	BAZ1A	ENSTRUP00000052089	ENSTRUP00000018575	Helicase ATP-binding domain-containing protein.	Bromodomain adjacent to zinc finger domain 1A.	0.760
ENSTRUP00000052089	LOC101062688	ENSTRUP00000052089	ENSTRUP00000025673	Helicase ATP-binding domain-containing protein.	DEK_C domain-containing protein.	0.614
ENSTRUP00000052089	LOC101067848	ENSTRUP00000052089	ENSTRUP00000071893	Helicase ATP-binding domain-containing protein.	Chromatin accessibility complex subunit 1.	0.514
ENSTRUP00000052089	LOC101068929	ENSTRUP00000052089	ENSTRUP00000079544	Helicase ATP-binding domain-containing protein.	TH1 domain-containing protein.	0.435
ENSTRUP00000052089	LOC101069989	ENSTRUP00000052089	ENSTRUP00000027822	Helicase ATP-binding domain-containing protein.	Myosin IG; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.435
ENSTRUP00000052089	LOC115252686	ENSTRUP00000052089	ENSTRUP00000058555	Helicase ATP-binding domain-containing protein.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.431
ENSTRUP00000052089	actl6a	ENSTRUP00000052089	ENSTRUP00000045079	Helicase ATP-binding domain-containing protein.	Actin-like 6A; Belongs to the actin family.	0.462
ENSTRUP00000052089	actr5	ENSTRUP00000052089	ENSTRUP00000008213	Helicase ATP-binding domain-containing protein.	Actin related protein 5; Belongs to the actin family.	0.695