14 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nedd1	NEDD1 gamma-tubulin ring complex targeting factor. (675 aa)
	LOC101061083	SMYLE_N domain-containing protein. (2021 aa)
	ENSTRUP00000027404	annotation not available (414 aa)
	cep85	Centrosomal protein 85. (745 aa)
	tubg1	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (451 aa)
	pcm1	Pericentriolar material 1 protein. (2076 aa)
	ENSTRUP00000049742	Cnn_1N domain-containing protein. (219 aa)
	ENSTRUP00000051420	Cnn_1N domain-containing protein. (163 aa)
	cep152	Centrosomal protein 152. (1575 aa)
	cep192	Centrosomal protein 192. (428 aa)
	ENSTRUP00000066839	annotation not available (288 aa)
	rabl2b	RAB, member of RAS oncogene family-like 2. (225 aa)
	bbs9	Bardet-Biedl syndrome 9. (975 aa)
	bbs4	Bardet-Biedl syndrome 4. (564 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000027404	ENSTRUP00000049742	ENSTRUP00000027404	ENSTRUP00000049742	annotation not available	Cnn_1N domain-containing protein.	0.415
ENSTRUP00000027404	ENSTRUP00000051420	ENSTRUP00000027404	ENSTRUP00000051420	annotation not available	Cnn_1N domain-containing protein.	0.640
ENSTRUP00000049742	ENSTRUP00000027404	ENSTRUP00000049742	ENSTRUP00000027404	Cnn_1N domain-containing protein.	annotation not available	0.415
ENSTRUP00000049742	LOC101061083	ENSTRUP00000049742	ENSTRUP00000008174	Cnn_1N domain-containing protein.	SMYLE_N domain-containing protein.	0.749
ENSTRUP00000051420	ENSTRUP00000027404	ENSTRUP00000051420	ENSTRUP00000027404	Cnn_1N domain-containing protein.	annotation not available	0.640
ENSTRUP00000051420	LOC101061083	ENSTRUP00000051420	ENSTRUP00000008174	Cnn_1N domain-containing protein.	SMYLE_N domain-containing protein.	0.764
ENSTRUP00000066839	cep85	ENSTRUP00000066839	ENSTRUP00000033129	annotation not available	Centrosomal protein 85.	0.468
ENSTRUP00000066839	nedd1	ENSTRUP00000066839	ENSTRUP00000086910	annotation not available	NEDD1 gamma-tubulin ring complex targeting factor.	0.481
LOC101061083	ENSTRUP00000049742	ENSTRUP00000008174	ENSTRUP00000049742	SMYLE_N domain-containing protein.	Cnn_1N domain-containing protein.	0.749
LOC101061083	ENSTRUP00000051420	ENSTRUP00000008174	ENSTRUP00000051420	SMYLE_N domain-containing protein.	Cnn_1N domain-containing protein.	0.764
bbs4	bbs9	ENSTRUP00000085935	ENSTRUP00000085217	Bardet-Biedl syndrome 4.	Bardet-Biedl syndrome 9.	0.995
bbs4	pcm1	ENSTRUP00000085935	ENSTRUP00000040906	Bardet-Biedl syndrome 4.	Pericentriolar material 1 protein.	0.860
bbs9	bbs4	ENSTRUP00000085217	ENSTRUP00000085935	Bardet-Biedl syndrome 9.	Bardet-Biedl syndrome 4.	0.995
bbs9	pcm1	ENSTRUP00000085217	ENSTRUP00000040906	Bardet-Biedl syndrome 9.	Pericentriolar material 1 protein.	0.402
cep192	cep85	ENSTRUP00000063370	ENSTRUP00000033129	Centrosomal protein 192.	Centrosomal protein 85.	0.468
cep192	nedd1	ENSTRUP00000063370	ENSTRUP00000086910	Centrosomal protein 192.	NEDD1 gamma-tubulin ring complex targeting factor.	0.481
cep85	ENSTRUP00000066839	ENSTRUP00000033129	ENSTRUP00000066839	Centrosomal protein 85.	annotation not available	0.468
cep85	cep192	ENSTRUP00000033129	ENSTRUP00000063370	Centrosomal protein 85.	Centrosomal protein 192.	0.468
nedd1	ENSTRUP00000066839	ENSTRUP00000086910	ENSTRUP00000066839	NEDD1 gamma-tubulin ring complex targeting factor.	annotation not available	0.481
nedd1	cep192	ENSTRUP00000086910	ENSTRUP00000063370	NEDD1 gamma-tubulin ring complex targeting factor.	Centrosomal protein 192.	0.481