83 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2SUW0_TAKRU	t-SNARE coiled-coil homology domain-containing protein. (284 aa)
	tsnare1	Si:ch211-208k15.1. (283 aa)
	bet1	Bet1 golgi vesicular membrane trafficking protein. (112 aa)
	LOC101071295	ADP ribosylation factor like GTPase 8B; Belongs to the small GTPase superfamily. Arf family. (186 aa)
	spg11	Spatacsin_C domain-containing protein. (2378 aa)
	gosr2	Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (212 aa)
	snap47	Synaptosome associated protein 47. (422 aa)
	LOC101063396	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (323 aa)
	stx7	Syntaxin 7-like; Belongs to the syntaxin family. (257 aa)
	stx5	Syntaxin 5A; Belongs to the syntaxin family. (330 aa)
	vti1a	Vesicle transport through interaction with t-SNAREs 1A. (224 aa)
	syt11	Synaptotagmin XIb. (459 aa)
	snap29	Synaptosome associated protein 29. (259 aa)
	LOC101066068	SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. (219 aa)
	ENSTRUP00000060597	Vesicle-associated membrane protein 3-like isoform X1. (116 aa)
	LOC101079833	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (231 aa)
	LOC101072029	Vesicle-associated membrane protein 1. (175 aa)
	LOC101067771	Syntaxin 1B; Belongs to the syntaxin family. (559 aa)
	LOC101063931	Myb_DNA-bind_5 domain-containing protein. (408 aa)
	vps39	VPS39 subunit of HOPS complex. (895 aa)
	LOC101066813	Syntaxin 3A; Belongs to the syntaxin family. (287 aa)
	rab13	RAB13, member RAS oncogene family. (200 aa)
	LOC101064639	t-SNARE coiled-coil homology domain-containing protein. (287 aa)
	tgfbrap1	Transforming growth factor, beta receptor associated protein 1. (1298 aa)
	LOC101072029-2	Zgc:92912. (123 aa)
	ENSTRUP00000076224	annotation not available (118 aa)
	LOC101071071	Vesicle-associated membrane protein 8 (endobrevin). (121 aa)
	LOC101075318	Ankyrin repeat and FYVE domain containing 1. (1190 aa)
	ENSTRUP00000078958	annotation not available (56 aa)
	pikfyve	PIPK domain-containing protein. (2110 aa)
	LOC101069909	Synaptotagmin VIIb. (672 aa)
	LOC101063708	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (207 aa)
	epg5	Ectopic P-granules autophagy protein 5 homolog (C. elegans). (2542 aa)
	LOC101076376	Syntaxin 2b; Belongs to the syntaxin family. (294 aa)
	stx4	Syntaxin 4; Belongs to the syntaxin family. (297 aa)
	LOC101076529	RAB7a, member RAS oncogene family. (207 aa)
	LOC101062144	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (264 aa)
	snap25	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (204 aa)
	syt4	Synaptotagmin IV. (473 aa)
	vps41	VPS41 subunit of HOPS complex. (866 aa)
	vamp4	Vesicle-associated membrane protein 4. (161 aa)
	atp13a2	Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1174 aa)
	LOC101080198	Synaptotagmin VIIa. (737 aa)
	yipf5	Protein YIPF. (257 aa)
	LOC101069563	V-SNARE coiled-coil homology domain-containing protein. (114 aa)
	ENSTRUP00000010653	Vesicle transport through interaction with t-SNAREs 1B. (160 aa)
	H2SE12_TAKRU	Uncharacterized protein. (114 aa)
	snapin	SNAP associated protein. (129 aa)
	H2S9L9_TAKRU	UV radiation resistance associated gene. (658 aa)
	vps11	Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. (926 aa)
	plekhm1	RUN domain-containing protein. (1071 aa)
	yipf4	Protein YIPF. (237 aa)
	trarg1	Trafficking regulator of GLUT4 (SLC2A4) 1a. (199 aa)
	LOC101065875	ADP-ribosylation factor-like 8A; Belongs to the small GTPase superfamily. Arf family. (187 aa)
	ENSTRUP00000086355	Vacuolar protein sorting-associated protein 8 homolog isoform X2. (1369 aa)
	vps8	VPS8 subunit of CORVET complex. (1371 aa)
	stx17	Syntaxin 17; Belongs to the syntaxin family. (295 aa)
	ENSTRUP00000084617	annotation not available (95 aa)
	stxbp6	Syntaxin binding protein 6 (amisyn). (233 aa)
	LOC101073763	V-SNARE coiled-coil homology domain-containing protein. (103 aa)
	stx6	Syntaxin-6_N domain-containing protein. (255 aa)
	ENSTRUP00000083588	Syntaxin 12/13. (80 aa)
	cln3	Battenin. (465 aa)
	LOC101061812	RAB7A, member RAS oncogene family. (207 aa)
	rab20	RAB20, member RAS oncogene family. (263 aa)
	ENSTRUP00000057607	Proline-rich transmembrane protein 2. (189 aa)
	snap23	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (215 aa)
	vamp7	Synaptobrevin-like 1; Belongs to the synaptobrevin family. (219 aa)
	ENSTRUP00000053981	annotation not available (823 aa)
	LOC105418679	Si:ch211-266g18.9. (893 aa)
	eea1	Early endosome antigen 1. (1396 aa)
	LOC101075501	t-SNARE coiled-coil homology domain-containing protein. (321 aa)
	svip	Si:ch73-147o17.1. (115 aa)
	gosr1	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (253 aa)
	LOC101061744	ADP-ribosylation factor-like 8Ba; Belongs to the small GTPase superfamily. Arf family. (186 aa)
	uso1	USO1 vesicle transport factor. (958 aa)
	stx10	Syntaxin 10. (257 aa)
	stx16	Syntaxin 16; Belongs to the syntaxin family. (317 aa)
	SEC22B	SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family. (275 aa)
	LOC101073835	Syntaxin 12; Belongs to the syntaxin family. (287 aa)
	ENSTRUP00000049627	Si:ch73-234b20.5. (102 aa)
	stx8	Syntaxin 8. (241 aa)
	LOC101072569	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (266 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000010653	ENSTRUP00000049627	ENSTRUP00000010653	ENSTRUP00000049627	Vesicle transport through interaction with t-SNAREs 1B.	Si:ch73-234b20.5.	0.789
ENSTRUP00000010653	ENSTRUP00000060597	ENSTRUP00000010653	ENSTRUP00000060597	Vesicle transport through interaction with t-SNAREs 1B.	Vesicle-associated membrane protein 3-like isoform X1.	0.789
ENSTRUP00000010653	ENSTRUP00000076224	ENSTRUP00000010653	ENSTRUP00000076224	Vesicle transport through interaction with t-SNAREs 1B.	annotation not available	0.797
ENSTRUP00000010653	ENSTRUP00000083588	ENSTRUP00000010653	ENSTRUP00000083588	Vesicle transport through interaction with t-SNAREs 1B.	Syntaxin 12/13.	0.779
ENSTRUP00000010653	ENSTRUP00000084617	ENSTRUP00000010653	ENSTRUP00000084617	Vesicle transport through interaction with t-SNAREs 1B.	annotation not available	0.737
ENSTRUP00000010653	LOC101066068	ENSTRUP00000010653	ENSTRUP00000059012	Vesicle transport through interaction with t-SNAREs 1B.	SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family.	0.721
ENSTRUP00000010653	LOC101069563	ENSTRUP00000010653	ENSTRUP00000011373	Vesicle transport through interaction with t-SNAREs 1B.	V-SNARE coiled-coil homology domain-containing protein.	0.737
ENSTRUP00000010653	LOC101071071	ENSTRUP00000010653	ENSTRUP00000076463	Vesicle transport through interaction with t-SNAREs 1B.	Vesicle-associated membrane protein 8 (endobrevin).	0.956
ENSTRUP00000010653	LOC101072029	ENSTRUP00000010653	ENSTRUP00000062594	Vesicle transport through interaction with t-SNAREs 1B.	Vesicle-associated membrane protein 1.	0.737
ENSTRUP00000010653	LOC101072029-2	ENSTRUP00000010653	ENSTRUP00000071912	Vesicle transport through interaction with t-SNAREs 1B.	Zgc:92912.	0.737
ENSTRUP00000010653	LOC101072569	ENSTRUP00000010653	ENSTRUP00000048334	Vesicle transport through interaction with t-SNAREs 1B.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.499
ENSTRUP00000010653	LOC101073763	ENSTRUP00000010653	ENSTRUP00000083879	Vesicle transport through interaction with t-SNAREs 1B.	V-SNARE coiled-coil homology domain-containing protein.	0.797
ENSTRUP00000010653	LOC101073835	ENSTRUP00000010653	ENSTRUP00000049703	Vesicle transport through interaction with t-SNAREs 1B.	Syntaxin 12; Belongs to the syntaxin family.	0.779
ENSTRUP00000010653	LOC105418679	ENSTRUP00000010653	ENSTRUP00000053730	Vesicle transport through interaction with t-SNAREs 1B.	Si:ch211-266g18.9.	0.649
ENSTRUP00000010653	SEC22B	ENSTRUP00000010653	ENSTRUP00000049725	Vesicle transport through interaction with t-SNAREs 1B.	SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.	0.721
ENSTRUP00000010653	bet1	ENSTRUP00000010653	ENSTRUP00000039376	Vesicle transport through interaction with t-SNAREs 1B.	Bet1 golgi vesicular membrane trafficking protein.	0.674
ENSTRUP00000010653	gosr1	ENSTRUP00000010653	ENSTRUP00000051164	Vesicle transport through interaction with t-SNAREs 1B.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.630
ENSTRUP00000010653	gosr2	ENSTRUP00000010653	ENSTRUP00000036442	Vesicle transport through interaction with t-SNAREs 1B.	Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	0.607
ENSTRUP00000010653	snap23	ENSTRUP00000010653	ENSTRUP00000055061	Vesicle transport through interaction with t-SNAREs 1B.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.486
ENSTRUP00000010653	snap29	ENSTRUP00000010653	ENSTRUP00000031641	Vesicle transport through interaction with t-SNAREs 1B.	Synaptosome associated protein 29.	0.422