STRINGSTRING
LOC101080126 LOC101080126 eloc eloc cdk13 cdk13 eaf2 eaf2 LOC101077779 LOC101077779 ell2 ell2 LOC105416376 LOC105416376 LOC101062747 LOC101062747 LOC115246431 LOC115246431 leo1 leo1 ell ell LOC101068670 LOC101068670 ENSTRUP00000049553 ENSTRUP00000049553 nelfb nelfb supt6h supt6h Ccnt2 Ccnt2 cdc73 cdc73 CCNK CCNK ercc6 ercc6 ENSTRUP00000059044 ENSTRUP00000059044 LOC101069848 LOC101069848 LOC101072365 LOC101072365 supt4h1 supt4h1 ctr9 ctr9 Ccnt1 Ccnt1 nelfa nelfa wdr61 wdr61 ENSTRUP00000070492 ENSTRUP00000070492 LOC101070508 LOC101070508 cdk12 cdk12 eaf1 eaf1 LOC101079666 LOC101079666 ENSTRUP00000071314 ENSTRUP00000071314 aff4 aff4 mllt1 mllt1 LOC101061452 LOC101061452 ice2 ice2 rtf1 rtf1 nelfcd nelfcd ENSTRUP00000082865 ENSTRUP00000082865 tonsl tonsl elp4 elp4 ice1 ice1 paf1 paf1 nufip1 nufip1 LOC101068432 LOC101068432 pex2 pex2 mllt3 mllt3 LOC101068554 LOC101068554 eloa eloa supt5h supt5h ssrp1 ssrp1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101080126Si:ch211-13k12.2. (598 aa)
elocElongin C paralog a; Belongs to the SKP1 family. (112 aa)
cdk13Cyclin-dependent kinase 13. (860 aa)
eaf2ELL associated factor 2. (309 aa)
LOC101077779Uncharacterized protein. (1160 aa)
ell2Elongation factor, RNA polymerase II, 2. (682 aa)
LOC105416376Elongin A, like. (624 aa)
LOC101062747Uncharacterized protein. (162 aa)
LOC115246431Retinoblastoma 1. (913 aa)
leo1LEO1 homolog, Paf1/RNA polymerase II complex component. (700 aa)
ellElongation factor RNA polymerase II. (625 aa)
LOC101068670Ubiquitin-like domain-containing protein. (119 aa)
ENSTRUP00000049553Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (88 aa)
nelfbNegative elongation factor complex member B. (613 aa)
supt6hTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1744 aa)
Ccnt2Cyclin T2; Belongs to the cyclin family. (731 aa)
cdc73Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (567 aa)
CCNKCyclin K; Belongs to the cyclin family. (547 aa)
ercc6Excision repair cross-complementation group 6. (1443 aa)
ENSTRUP00000059044annotation not available (72 aa)
LOC101069848Retinoblastoma-associated protein. (913 aa)
LOC101072365Uncharacterized protein. (566 aa)
supt4h1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
ctr9CTR9 homolog, Paf1/RNA polymerase II complex component. (1138 aa)
Ccnt1Cyclin-T1 isoform X2. (200 aa)
nelfaNegative elongation factor complex member A. (571 aa)
wdr61WD repeat domain 61. (305 aa)
ENSTRUP00000070492annotation not available (141 aa)
LOC101070508Elongin-B isoform X1. (114 aa)
cdk12Cyclin-dependent kinase 12 isoform X1. (1349 aa)
eaf1ELL associated factor 1. (257 aa)
LOC101079666Cyclin T2b; Belongs to the cyclin family. (613 aa)
ENSTRUP00000071314annotation not available (188 aa)
aff4AF4/FMR2 family, member 4. (1159 aa)
mllt1MLLT1 super elongation complex subunit a. (582 aa)
LOC101061452Occludin; May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier. Belongs to the ELL/occludin family. (514 aa)
ice2Interactor of little elongator complex ELL subunit 2. (893 aa)
rtf1RTF1 homolog, Paf1/RNA polymerase II complex component. (675 aa)
nelfcdNegative elongation factor complex member C/D. (579 aa)
ENSTRUP00000082865Negative elongation factor complex member E. (242 aa)
tonslTonsoku-like, DNA repair protein. (1428 aa)
elp4Elongator acetyltransferase complex subunit 4. (408 aa)
ice1Uncharacterized protein. (233 aa)
paf1PAF1 homolog, Paf1/RNA polymerase II complex component. (530 aa)
nufip1C2H2-type domain-containing protein. (577 aa)
LOC101068432Occludin; May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier. Belongs to the ELL/occludin family. (546 aa)
pex2Peroxisomal biogenesis factor 2. (355 aa)
mllt3MLLT3 super elongation complex subunit. (494 aa)
LOC101068554SPT16 homolog, facilitates chromatin remodeling subunit. (1031 aa)
eloaElongin A. (648 aa)
supt5hTranscription elongation factor SPT5. (1082 aa)
ssrp1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (806 aa)
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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