STRINGSTRING
ctr9 ctr9 rtf1 rtf1 leo1 leo1 cdc73 cdc73 pex2 pex2 wdr61 wdr61 paf1 paf1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ctr9CTR9 homolog, Paf1/RNA polymerase II complex component. (1138 aa)
rtf1RTF1 homolog, Paf1/RNA polymerase II complex component. (675 aa)
leo1LEO1 homolog, Paf1/RNA polymerase II complex component. (700 aa)
cdc73Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (567 aa)
pex2Peroxisomal biogenesis factor 2. (355 aa)
wdr61WD repeat domain 61. (305 aa)
paf1PAF1 homolog, Paf1/RNA polymerase II complex component. (530 aa)
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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