STRINGSTRING
LOC101070338 LOC101070338 opn5 opn5 LOC101069511 LOC101069511 crabp1 crabp1 rbp1 rbp1 rbp2 rbp2 CRABP1 CRABP1 LOC101076212 LOC101076212 LOC101079102 LOC101079102 LOC101066358 LOC101066358 LOC778011 LOC778011 rho rho rbp4 rbp4 opn3 opn3 LOC101075984 LOC101075984 LOC101078874 LOC101078874 LOC101065985 LOC101065985 ENSTRUP00000043867 ENSTRUP00000043867 LOC101072362 LOC101072362 stra6 stra6 LOC101072362-2 LOC101072362-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101070338Retinol binding protein 3. (617 aa)
opn5Opsin 5; Belongs to the G-protein coupled receptor 1 family. (394 aa)
LOC101069511Retinol binding protein 4, like; Belongs to the calycin superfamily. Lipocalin family. (196 aa)
crabp1Cellular retinoic acid-binding protein 1; Cytosolic CRABPs may regulate the access of retinoic acid to the nuclear retinoic acid receptors. (137 aa)
rbp1Retinol binding protein 1, cellular, tandem duplicate 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (134 aa)
rbp2Retinol binding protein 2a, cellular; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (249 aa)
CRABP1Cellular retinoic acid binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (143 aa)
LOC101076212Opsin 8, group member b; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily. (345 aa)
LOC101079102Apolipoprotein Da, duplicate 2; Belongs to the calycin superfamily. Lipocalin family. (190 aa)
LOC101066358Cellular retinoic acid binding protein 2, b; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (177 aa)
LOC778011Rhodopsin. (353 aa)
rhoRhodopsin. (353 aa)
rbp4Retinol binding protein 4, plasma; Belongs to the calycin superfamily. Lipocalin family. (192 aa)
opn3Opsin 3. (387 aa)
LOC101075984Opsin 8, group member a; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily. (358 aa)
LOC101078874Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (190 aa)
LOC101065985Uncharacterized protein. (679 aa)
ENSTRUP00000043867annotation not available (590 aa)
LOC101072362Cellular retinoic acid binding protein 2, a; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (142 aa)
stra6Stimulated by retinoic acid 6. (662 aa)
LOC101072362-2Cellular retinoic acid-binding protein 2-like. (142 aa)
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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