15 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101062443	Plexin A1. (1896 aa)
	LOC101068409	Plexin b2a. (1556 aa)
	plxnc1	Plexin C1. (564 aa)
	LOC101071528	Macrophage stimulating 1 receptor a. (1375 aa)
	PLXND1	Plexin D1. (1802 aa)
	plxna3	Plexin A3. (1910 aa)
	mst1r	Macrophage stimulating 1 receptor b. (1374 aa)
	LOC101078657	Sema domain-containing protein. (2189 aa)
	plxna2	Plexin A2. (1901 aa)
	H2UK42_TAKRU	Sema domain-containing protein. (1981 aa)
	LOC101072330	Plexin b2b. (1849 aa)
	LOC101062161	Plexin A1a. (1910 aa)
	nrp1	Neuropilin; Belongs to the neuropilin family. (955 aa)
	met	Uncharacterized protein. (1425 aa)
	plxna4	Plexin A4. (1913 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2UK42_TAKRU	LOC101071528	ENSTRUP00000067092	ENSTRUP00000025241	Sema domain-containing protein.	Macrophage stimulating 1 receptor a.	0.549
H2UK42_TAKRU	met	ENSTRUP00000067092	ENSTRUP00000078415	Sema domain-containing protein.	Uncharacterized protein.	0.557
H2UK42_TAKRU	mst1r	ENSTRUP00000067092	ENSTRUP00000035729	Sema domain-containing protein.	Macrophage stimulating 1 receptor b.	0.549
H2UK42_TAKRU	nrp1	ENSTRUP00000067092	ENSTRUP00000068935	Sema domain-containing protein.	Neuropilin; Belongs to the neuropilin family.	0.670
LOC101062161	LOC101071528	ENSTRUP00000068851	ENSTRUP00000025241	Plexin A1a.	Macrophage stimulating 1 receptor a.	0.428
LOC101062161	met	ENSTRUP00000068851	ENSTRUP00000078415	Plexin A1a.	Uncharacterized protein.	0.428
LOC101062161	mst1r	ENSTRUP00000068851	ENSTRUP00000035729	Plexin A1a.	Macrophage stimulating 1 receptor b.	0.428
LOC101062161	nrp1	ENSTRUP00000068851	ENSTRUP00000068935	Plexin A1a.	Neuropilin; Belongs to the neuropilin family.	0.728
LOC101062443	LOC101071528	ENSTRUP00000008385	ENSTRUP00000025241	Plexin A1.	Macrophage stimulating 1 receptor a.	0.428
LOC101062443	met	ENSTRUP00000008385	ENSTRUP00000078415	Plexin A1.	Uncharacterized protein.	0.428
LOC101062443	mst1r	ENSTRUP00000008385	ENSTRUP00000035729	Plexin A1.	Macrophage stimulating 1 receptor b.	0.428
LOC101062443	nrp1	ENSTRUP00000008385	ENSTRUP00000068935	Plexin A1.	Neuropilin; Belongs to the neuropilin family.	0.728
LOC101068409	LOC101071528	ENSTRUP00000021867	ENSTRUP00000025241	Plexin b2a.	Macrophage stimulating 1 receptor a.	0.549
LOC101068409	met	ENSTRUP00000021867	ENSTRUP00000078415	Plexin b2a.	Uncharacterized protein.	0.549
LOC101068409	mst1r	ENSTRUP00000021867	ENSTRUP00000035729	Plexin b2a.	Macrophage stimulating 1 receptor b.	0.549
LOC101068409	nrp1	ENSTRUP00000021867	ENSTRUP00000068935	Plexin b2a.	Neuropilin; Belongs to the neuropilin family.	0.670
LOC101071528	H2UK42_TAKRU	ENSTRUP00000025241	ENSTRUP00000067092	Macrophage stimulating 1 receptor a.	Sema domain-containing protein.	0.549
LOC101071528	LOC101062161	ENSTRUP00000025241	ENSTRUP00000068851	Macrophage stimulating 1 receptor a.	Plexin A1a.	0.428
LOC101071528	LOC101062443	ENSTRUP00000025241	ENSTRUP00000008385	Macrophage stimulating 1 receptor a.	Plexin A1.	0.428
LOC101071528	LOC101068409	ENSTRUP00000025241	ENSTRUP00000021867	Macrophage stimulating 1 receptor a.	Plexin b2a.	0.549