(10 nodes) Viral release from host cell network (Takifugu rubripes)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101079670	Tumor susceptibility 101a. (390 aa)
	PC	Pyruvate carboxylase. (1206 aa)
	LOC101068384	Tumor susceptibility gene 101 protein-like. (192 aa)
	ist1	IST1 factor associated with ESCRT-III. (348 aa)
	vps4b	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (515 aa)
	vps4a	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. (444 aa)
	vps37b	Zgc:114173. (278 aa)
	ddb1	Damage-specific DNA binding protein 1. (1140 aa)
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (434 aa)
	LOC101064351	Tripartite motif containing 62, tandem duplicate 1. (475 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101068384	VPS4B	ENSTRUP00000080066	ENSTRUP00000041374	Tumor susceptibility gene 101 protein-like.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.472
LOC101068384	ist1	ENSTRUP00000080066	ENSTRUP00000058412	Tumor susceptibility gene 101 protein-like.	IST1 factor associated with ESCRT-III.	0.468
LOC101068384	vps37b	ENSTRUP00000080066	ENSTRUP00000049727	Tumor susceptibility gene 101 protein-like.	Zgc:114173.	0.969
LOC101068384	vps4a	ENSTRUP00000080066	ENSTRUP00000052020	Tumor susceptibility gene 101 protein-like.	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	0.472
LOC101068384	vps4b	ENSTRUP00000080066	ENSTRUP00000053299	Tumor susceptibility gene 101 protein-like.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.472
LOC101079670	VPS4B	ENSTRUP00000080370	ENSTRUP00000041374	Tumor susceptibility 101a.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.472
LOC101079670	ist1	ENSTRUP00000080370	ENSTRUP00000058412	Tumor susceptibility 101a.	IST1 factor associated with ESCRT-III.	0.468
LOC101079670	vps37b	ENSTRUP00000080370	ENSTRUP00000049727	Tumor susceptibility 101a.	Zgc:114173.	0.969
LOC101079670	vps4a	ENSTRUP00000080370	ENSTRUP00000052020	Tumor susceptibility 101a.	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	0.472
LOC101079670	vps4b	ENSTRUP00000080370	ENSTRUP00000053299	Tumor susceptibility 101a.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.472
VPS4B	LOC101068384	ENSTRUP00000041374	ENSTRUP00000080066	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	Tumor susceptibility gene 101 protein-like.	0.472
VPS4B	LOC101079670	ENSTRUP00000041374	ENSTRUP00000080370	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	Tumor susceptibility 101a.	0.472
VPS4B	ist1	ENSTRUP00000041374	ENSTRUP00000058412	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	IST1 factor associated with ESCRT-III.	0.930
VPS4B	vps4a	ENSTRUP00000041374	ENSTRUP00000052020	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	0.939
VPS4B	vps4b	ENSTRUP00000041374	ENSTRUP00000053299	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.900
ist1	LOC101068384	ENSTRUP00000058412	ENSTRUP00000080066	IST1 factor associated with ESCRT-III.	Tumor susceptibility gene 101 protein-like.	0.468
ist1	LOC101079670	ENSTRUP00000058412	ENSTRUP00000080370	IST1 factor associated with ESCRT-III.	Tumor susceptibility 101a.	0.468
ist1	VPS4B	ENSTRUP00000058412	ENSTRUP00000041374	IST1 factor associated with ESCRT-III.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.930
ist1	vps37b	ENSTRUP00000058412	ENSTRUP00000049727	IST1 factor associated with ESCRT-III.	Zgc:114173.	0.442
ist1	vps4a	ENSTRUP00000058412	ENSTRUP00000052020	IST1 factor associated with ESCRT-III.	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	0.930