54 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPL5	Ribosomal protein L5b. (343 aa)
	rplp0	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (314 aa)
	eri1	Exoribonuclease 1. (340 aa)
	TACO1	Translational activator of mitochondrially encoded cytochrome c oxidase I. (286 aa)
	mrps18a	Mitochondrial ribosomal protein S18A. (208 aa)
	utp25	UTP25 small subunit processor component. (780 aa)
	ENSTRUP00000079751	annotation not available (219 aa)
	mrpl20	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family. (149 aa)
	LOC101070911	Lipase, hormone-sensitive a. (703 aa)
	ENSTRUP00000076039	Translational activator of cytochrome c oxidase 1-like. (281 aa)
	LOC101066424	EMG1 N1-specific pseudouridine methyltransferase. (237 aa)
	rps4x	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
	Aknad1	Protein AKNAD1 isoform X1. (1200 aa)
	LOC101061501	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (242 aa)
	rps11	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (187 aa)
	imp3	IMP U3 small nucleolar ribonucleoprotein 3. (220 aa)
	nol12	Nucleolar protein 12. (228 aa)
	utp23	UTP23 small subunit processome component. (254 aa)
	nop53	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (466 aa)
	mrps18c	Mitochondrial ribosomal protein S18C. (130 aa)
	rpl8	Ribosomal protein L8. (276 aa)
	rpl9	Ribosomal protein L9. (211 aa)
	rpl11	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (179 aa)
	fastkd2	FAST kinase domains 2. (663 aa)
	mrpl18	Mitochondrial ribosomal protein L18. (189 aa)
	rpl12	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (168 aa)
	cavin1	Caveolae associated protein 1a. (417 aa)
	mrps11	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (214 aa)
	ENSTRUP00000049547	Mitochondrial ribosomal protein S6. (111 aa)
	rpf1	Ribosome production factor 1 homolog. (351 aa)
	rpf2	Ribosome production factor 2 homolog. (315 aa)
	rpl37	Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
	mrpl16	Mitochondrial ribosomal protein L16. (257 aa)
	LOC101072840	Si:dkey-208k4.2. (362 aa)
	rps9	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
	mrps27	Mitochondrial ribosomal protein S27. (413 aa)
	MTERF4	Mitochondrial transcription termination factor 4. (342 aa)
	rps18	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (144 aa)
	mrpl11	Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. (194 aa)
	rcc1l	RCC1 like. (461 aa)
	brix1	Brix domain containing 2. (341 aa)
	mrps7	Mitochondrial ribosomal protein S7. (233 aa)
	H2TBQ8_TAKRU	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (296 aa)
	mdm2	MDM2 proto-oncogene. (495 aa)
	ddx28	DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. (539 aa)
	LOC101072270	General transcription factor IIIAa. (359 aa)
	LOC101066755	Caveolae associated protein 1b. (469 aa)
	RPL5-2	Ribosomal protein L5. (298 aa)
	ngrn	Neugrin, neurite outgrowth associated. (303 aa)
	ptcd3	Pentatricopeptide repeat domain 3. (652 aa)
	imp4	IMP U3 small nucleolar ribonucleoprotein 4. (326 aa)
	LOC115250384	RRNA small subunit pseudouridine methyltransferase Nep1. (237 aa)
	LOC101067661	Lipase, hormone-sensitive b. (834 aa)
	eral1	Era-like 12S mitochondrial rRNA chaperone 1. (464 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Aknad1	ENSTRUP00000079751	ENSTRUP00000068952	ENSTRUP00000079751	Protein AKNAD1 isoform X1.	annotation not available	0.863
Aknad1	H2TBQ8_TAKRU	ENSTRUP00000068952	ENSTRUP00000022100	Protein AKNAD1 isoform X1.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.515
Aknad1	LOC101061501	ENSTRUP00000068952	ENSTRUP00000068569	Protein AKNAD1 isoform X1.	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.863
Aknad1	RPL5	ENSTRUP00000068952	ENSTRUP00000001245	Protein AKNAD1 isoform X1.	Ribosomal protein L5b.	0.967
Aknad1	RPL5-2	ENSTRUP00000068952	ENSTRUP00000011708	Protein AKNAD1 isoform X1.	Ribosomal protein L5.	0.967
Aknad1	brix1	ENSTRUP00000068952	ENSTRUP00000028803	Protein AKNAD1 isoform X1.	Brix domain containing 2.	0.710
Aknad1	imp3	ENSTRUP00000068952	ENSTRUP00000065466	Protein AKNAD1 isoform X1.	IMP U3 small nucleolar ribonucleoprotein 3.	0.602
Aknad1	mrpl11	ENSTRUP00000068952	ENSTRUP00000029806	Protein AKNAD1 isoform X1.	Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.	0.621
Aknad1	mrps11	ENSTRUP00000068952	ENSTRUP00000049602	Protein AKNAD1 isoform X1.	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.	0.528
Aknad1	mrps7	ENSTRUP00000068952	ENSTRUP00000027624	Protein AKNAD1 isoform X1.	Mitochondrial ribosomal protein S7.	0.863
Aknad1	nol12	ENSTRUP00000068952	ENSTRUP00000065025	Protein AKNAD1 isoform X1.	Nucleolar protein 12.	0.471
Aknad1	nop53	ENSTRUP00000068952	ENSTRUP00000063105	Protein AKNAD1 isoform X1.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.758
Aknad1	rpf1	ENSTRUP00000068952	ENSTRUP00000048889	Protein AKNAD1 isoform X1.	Ribosome production factor 1 homolog.	0.702
Aknad1	rpf2	ENSTRUP00000068952	ENSTRUP00000046741	Protein AKNAD1 isoform X1.	Ribosome production factor 2 homolog.	0.582
Aknad1	rpl11	ENSTRUP00000068952	ENSTRUP00000055933	Protein AKNAD1 isoform X1.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.993
Aknad1	rpl12	ENSTRUP00000068952	ENSTRUP00000049929	Protein AKNAD1 isoform X1.	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	0.987
Aknad1	rpl8	ENSTRUP00000068952	ENSTRUP00000057980	Protein AKNAD1 isoform X1.	Ribosomal protein L8.	0.988
Aknad1	rpl9	ENSTRUP00000068952	ENSTRUP00000057540	Protein AKNAD1 isoform X1.	Ribosomal protein L9.	0.992
Aknad1	rplp0	ENSTRUP00000068952	ENSTRUP00000040545	Protein AKNAD1 isoform X1.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.979
Aknad1	rps11	ENSTRUP00000068952	ENSTRUP00000068429	Protein AKNAD1 isoform X1.	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.983