19 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mrps11	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (214 aa)
	LOC101077558	40S ribosomal protein S27. (91 aa)
	ENSTRUP00000075405	annotation not available (108 aa)
	eif2d	Eukaryotic translation initiation factor 2D. (583 aa)
	LOC101061501	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (242 aa)
	DHX29	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1414 aa)
	rps6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	LOC101068302	40S ribosomal protein S27. (97 aa)
	rps21	Ribosomal protein S21. (161 aa)
	Rps23	Small subunit ribosomal protein S23e. (154 aa)
	rps9	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
	rps3a	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
	RPS29	Ribosomal protein S29. (100 aa)
	Rps26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (111 aa)
	fau	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	H2TER7_TAKRU	Ribosomal protein S28. (53 aa)
	rps2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
	LOC101069505	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (306 aa)
	ENSTRUP00000079751	annotation not available (219 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DHX29	H2TER7_TAKRU	ENSTRUP00000068521	ENSTRUP00000023160	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S28.	0.425
DHX29	mrps11	ENSTRUP00000068521	ENSTRUP00000049602	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.	0.464
DHX29	rps2	ENSTRUP00000068521	ENSTRUP00000016765	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.464
DHX29	rps3a	ENSTRUP00000068521	ENSTRUP00000038638	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.427
DHX29	rps6	ENSTRUP00000068521	ENSTRUP00000053579	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.591
DHX29	rps9	ENSTRUP00000068521	ENSTRUP00000040636	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.556
ENSTRUP00000075405	ENSTRUP00000079751	ENSTRUP00000075405	ENSTRUP00000079751	annotation not available	annotation not available	0.949
ENSTRUP00000075405	H2TER7_TAKRU	ENSTRUP00000075405	ENSTRUP00000023160	annotation not available	Ribosomal protein S28.	0.988
ENSTRUP00000075405	LOC101061501	ENSTRUP00000075405	ENSTRUP00000068569	annotation not available	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.949
ENSTRUP00000075405	LOC101069505	ENSTRUP00000075405	ENSTRUP00000010856	annotation not available	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family.	0.978
ENSTRUP00000075405	RPS29	ENSTRUP00000075405	ENSTRUP00000031229	annotation not available	Ribosomal protein S29.	0.985
ENSTRUP00000075405	Rps23	ENSTRUP00000075405	ENSTRUP00000077931	annotation not available	Small subunit ribosomal protein S23e.	0.986
ENSTRUP00000075405	Rps26	ENSTRUP00000075405	ENSTRUP00000030482	annotation not available	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.989
ENSTRUP00000075405	eif2d	ENSTRUP00000075405	ENSTRUP00000074298	annotation not available	Eukaryotic translation initiation factor 2D.	0.498
ENSTRUP00000075405	fau	ENSTRUP00000075405	ENSTRUP00000029977	annotation not available	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ENSTRUP00000075405	mrps11	ENSTRUP00000075405	ENSTRUP00000049602	annotation not available	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.	0.908
ENSTRUP00000075405	rps2	ENSTRUP00000075405	ENSTRUP00000016765	annotation not available	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.984
ENSTRUP00000075405	rps21	ENSTRUP00000075405	ENSTRUP00000051336	annotation not available	Ribosomal protein S21.	0.987
ENSTRUP00000075405	rps3a	ENSTRUP00000075405	ENSTRUP00000038638	annotation not available	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.987
ENSTRUP00000075405	rps6	ENSTRUP00000075405	ENSTRUP00000053579	annotation not available	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.981