STRINGSTRING
Sec61b Sec61b sel1l sel1l rhbdd1 rhbdd1 hsp90b1 hsp90b1 derl2 derl2 ufd1 ufd1 hm13 hm13 selenos selenos vcp vcp ENSTRUP00000077339 ENSTRUP00000077339 LOC115251968 LOC115251968 faf2 faf2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sec61bUncharacterized protein. (103 aa)
sel1lSEL1L adaptor subunit of ERAD E3 ubiquitin ligase. (823 aa)
rhbdd1Rhomboid domain containing 1. (372 aa)
hsp90b1Heat shock protein 90, beta (grp94), member 1. (803 aa)
derl2Derlin-2/3. (239 aa)
ufd1Ubiquitin recognition factor in ER associated degradation 1. (400 aa)
hm13Histocompatibility (minor) 13. (417 aa)
selenosSelenoprotein S. (174 aa)
vcpValosin containing protein; Belongs to the AAA ATPase family. (819 aa)
ENSTRUP00000077339Selenoprotein S. (214 aa)
LOC115251968Selenoprotein S-like. (154 aa)
faf2Fas associated factor family member 2. (445 aa)
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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