38 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rapgef2	Rap guanine nucleotide exchange factor (GEF) 2. (1642 aa)
	poldip2	Polymerase (DNA-directed), delta interacting protein 2. (463 aa)
	LOC101073166	Uncharacterized protein. (383 aa)
	sppl3	Signal peptide peptidase 3. (389 aa)
	ENSTRUP00000080100	Nuclear VCP like. (860 aa)
	bambi	BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a. (260 aa)
	LOC115250255	Sperm-associated antigen 8-like. (178 aa)
	apoe2	Apolipoprotein E2. (276 aa)
	LOC115248448	E1A binding protein p300 b. (2795 aa)
	LOC101063812	Vitronectin b. (468 aa)
	spon1	Spondin 1a. (861 aa)
	LOC101079688-2	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (275 aa)
	rapgef6	Rap guanine nucleotide exchange factor (GEF) 6. (1671 aa)
	ENSTRUP00000064066	E1A binding protein p300 b. (2625 aa)
	prkn	Ubiquitin-like domain-containing protein. (532 aa)
	abl1	Tyrosine-protein kinase. (1115 aa)
	LOC101067833	RING-type domain-containing protein. (192 aa)
	LOC101073783	Spondin domain-containing protein. (821 aa)
	LOC101061217	Si:dkey-3h3.3. (361 aa)
	ide	Insulin-degrading enzyme; Belongs to the peptidase M16 family. (1056 aa)
	LOC101069856	Tribbles pseudokinase 3. (349 aa)
	LOC101069608	Bone morphogenetic protein 16. (478 aa)
	ENSTRUP00000051898	PLAT domain-containing protein. (198 aa)
	ENSTRUP00000051329	annotation not available (188 aa)
	cthrc1	Collagen triple helix repeat containing 1b. (228 aa)
	bmp4	Bone morphogenetic protein 4. (459 aa)
	cldn5b	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (215 aa)
	LOC101070643	E1A binding protein p300 a. (2046 aa)
	cldn5	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (215 aa)
	LOC101063214	Vitronectin a. (535 aa)
	LOC101064836	Zgc:66440. (361 aa)
	pin1	Peptidyl-prolyl cis-trans isomerase. (155 aa)
	men1	Multiple endocrine neoplasia I. (636 aa)
	apoe1	Uncharacterized protein. (247 aa)
	abl2	Tyrosine-protein kinase. (1214 aa)
	LOC101072295	Nuclear VCP like; Belongs to the AAA ATPase family. (860 aa)
	cdk5	Cyclin-dependent kinase 5. (292 aa)
	H2SAI0_TAKRU	Receptor-interacting serine-threonine kinase 2. (554 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2SAI0_TAKRU	prkn	ENSTRUP00000009406	ENSTRUP00000062233	Receptor-interacting serine-threonine kinase 2.	Ubiquitin-like domain-containing protein.	0.489
LOC101063214	apoe1	ENSTRUP00000040872	ENSTRUP00000030259	Vitronectin a.	Uncharacterized protein.	0.445
LOC101063214	apoe2	ENSTRUP00000040872	ENSTRUP00000074375	Vitronectin a.	Apolipoprotein E2.	0.522
LOC101063812	apoe1	ENSTRUP00000067819	ENSTRUP00000030259	Vitronectin b.	Uncharacterized protein.	0.445
LOC101063812	apoe2	ENSTRUP00000067819	ENSTRUP00000074375	Vitronectin b.	Apolipoprotein E2.	0.522
LOC101079688-2	cldn5	ENSTRUP00000065717	ENSTRUP00000042169	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.667
LOC101079688-2	cldn5b	ENSTRUP00000065717	ENSTRUP00000047657	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.668
abl1	abl2	ENSTRUP00000061821	ENSTRUP00000014750	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.914
abl1	cdk5	ENSTRUP00000061821	ENSTRUP00000009566	Tyrosine-protein kinase.	Cyclin-dependent kinase 5.	0.488
abl2	abl1	ENSTRUP00000014750	ENSTRUP00000061821	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.914
abl2	cdk5	ENSTRUP00000014750	ENSTRUP00000009566	Tyrosine-protein kinase.	Cyclin-dependent kinase 5.	0.488
apoe1	LOC101063214	ENSTRUP00000030259	ENSTRUP00000040872	Uncharacterized protein.	Vitronectin a.	0.445
apoe1	LOC101063812	ENSTRUP00000030259	ENSTRUP00000067819	Uncharacterized protein.	Vitronectin b.	0.445
apoe2	LOC101063214	ENSTRUP00000074375	ENSTRUP00000040872	Apolipoprotein E2.	Vitronectin a.	0.522
apoe2	LOC101063812	ENSTRUP00000074375	ENSTRUP00000067819	Apolipoprotein E2.	Vitronectin b.	0.522
cdk5	abl1	ENSTRUP00000009566	ENSTRUP00000061821	Cyclin-dependent kinase 5.	Tyrosine-protein kinase.	0.488
cdk5	abl2	ENSTRUP00000009566	ENSTRUP00000014750	Cyclin-dependent kinase 5.	Tyrosine-protein kinase.	0.488
cdk5	prkn	ENSTRUP00000009566	ENSTRUP00000062233	Cyclin-dependent kinase 5.	Ubiquitin-like domain-containing protein.	0.447
cldn5	LOC101079688-2	ENSTRUP00000042169	ENSTRUP00000065717	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.667
cldn5	cldn5b	ENSTRUP00000042169	ENSTRUP00000047657	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.654