STRINGSTRING
fmr1 fmr1 LOC101069559 LOC101069559 LOC101072865 LOC101072865 ABI1 ABI1 ube2k ube2k LOC101076559 LOC101076559 abitram abitram ENSTRUP00000051726 ENSTRUP00000051726 Myo3a Myo3a myo3b myo3b LOC101062654 LOC101062654 morn4 morn4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fmr1Fragile X mental retardation 1. (604 aa)
LOC101069559Abl-interactor 1b. (513 aa)
LOC101072865Uncharacterized protein. (145 aa)
ABI1Abl-interactor 1a. (540 aa)
ube2kUbiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
LOC101076559ABI family, member 3b. (105 aa)
abitramActin binding transcription modulator. (181 aa)
ENSTRUP00000051726Ubiquitin-conjugating enzyme (huntingtin interacting protein 2). (192 aa)
Myo3aMyosin-IIIa isoform X1. (1710 aa)
myo3bMyosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1296 aa)
LOC101062654AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (963 aa)
morn4MORN repeat containing 4. (170 aa)
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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