STRINGSTRING
Rc3h2 Rc3h2 eprs1 eprs1 rc3h1 rc3h1 zc3h12a zc3h12a txndc11 txndc11 mettl16 mettl16 LOC101069633 LOC101069633 fmr1 fmr1 dazap1 dazap1 larp6 larp6 dhx9 dhx9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rc3h2Ring finger and CCCH-type domains 2. (1042 aa)
eprs1Glutamyl-prolyl-tRNA synthetase. (1578 aa)
rc3h1Ring finger and CCCH-type domains 1b. (1123 aa)
zc3h12aSi:dkey-206d17.12. (176 aa)
txndc11Thioredoxin domain containing 11. (849 aa)
mettl16U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...] (559 aa)
LOC101069633AT rich interactive domain 5A (MRF1-like). (549 aa)
fmr1Fragile X mental retardation 1. (604 aa)
dazap1DAZ associated protein 1. (435 aa)
larp6La ribonucleoprotein domain family, member 6a. (670 aa)
dhx9DRBM domain-containing protein. (1270 aa)
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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