STRINGSTRING
ENSTRUP00000010653 ENSTRUP00000010653 LOC101066068 LOC101066068 uso1 uso1 SEC22B SEC22B bet1 bet1 stx5 stx5 vti1a vti1a yipf5 yipf5 yipf4 yipf4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSTRUP00000010653Vesicle transport through interaction with t-SNAREs 1B. (160 aa)
LOC101066068SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. (219 aa)
uso1USO1 vesicle transport factor. (958 aa)
SEC22BSEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family. (275 aa)
bet1Bet1 golgi vesicular membrane trafficking protein. (112 aa)
stx5Syntaxin 5A; Belongs to the syntaxin family. (330 aa)
vti1aVesicle transport through interaction with t-SNAREs 1A. (224 aa)
yipf5Protein YIPF. (257 aa)
yipf4Protein YIPF. (237 aa)
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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